CD2H gitForager

International Neuroinformatics Coordinating Facility (INCF)

Login: INCF

Company: null

Location: Stockholm

email: info@incf.org

Blog: http://www.incf.org

Members

Repositories

2017-11-09-sfn: null
3d-printing-of-brain-regions: Goal is to arrive at a pipeline that takes an MRI scan of a human or animal brain, processes and segments it, and produces a collection of 3d printable files that clip together.
ansible-dataspace: Ansible roles for INCF DataSpace: http://www.incf.org/resources/data-space
apine: null
BIDS: Brain Imaging Data Structure
BIDS2ISATab: Extract ISA-Tab compatible metadata from Brain Imaging Data Structure compatible datasets
BIDS2NDA: A conversion tool for creating NDA compatible metadata representation from BIDS datasets.
BIDS-examples: A set of BIDS compatible datasets with empty nifti files that can be used for testing software.
bids-starter-kit: Collection of tutorials, wikis, and templates to get you started with creating BIDS compliant datasets
bidsutils: Utility functions for working with BIDS compatible datasets
bids-validator: Validator for the Brain Imaging Data Structure
biostar-central: DEPRECATED, please go to upstream on
BrainImagingPipelines: BIPs
Computational-Neurosciences-Ontology--C.N.O.-: null
configuration: a simple, but flexible, way for anyone to stand up an instance of the edX platform that is fully configured and ready-to-go
csa: The Python implementation of the Connection-Set Algebra
dai-api-wsgi: DAI API Demo
dbclient: Drop Box Client for ImageJ Repo 2
dsni: null
eeg2: null
eeg-database: EEG/ERP portal enables community researchers to store, update, download and search data and metadata from EEG/ERP experiments. The system is developed as a standalone product; the database access is available through a web interface.
files_irods: Integration with iRODS
GOOGLESUMMERCODE2016: Active Segmentation Plugin for ImageJ
HAWG-examples: HAWG example JSON files
ids-tools: INCF Dataspace utilities
ImageReconstruction: Reconstruction of 3D volumetric dataset from a collection of 2D slices
ImageRegistration: Registration of microscopy images to atlases
incf-dai: Automatically exported from code.google.com/p/incf-dai
incf.dai: null
incf-map: null
libneurosim: Common interfaces for neuronal simulators
metadata-wg: null
minds-schema: null
MUSIC: MUSIC, the MUltiSimulation Coordinator
nap: neuroinformatics app platform
nes: null
neurohdf: Unifying neuroscientific data types with HDF5
neuroshapes: SHACL shapes for neuroscience related entities
nidm: Neuroimaging Data Model (NIDM): describing neuroimaging data and provenance
nineml-catalog: A collection of 9ML example component classes
NineML_demo_2016: null
nineml-python: A Python library for reading, parsing, validating and writing the 9ML (http://nineml.net) object model
nineml-spec: Specification of the NineML model description language.
odml-terminologies: odml-terminologies defining terms to annotate electrophysiological data
old_nineml_repo: null
one_click: One Click Sharing
openfmri2bids: Convert OpenfMRI dataset to BIDS.
p3-validator: Performs validation of odd-ball paradigm data using P300 classification
ProvenanceLibrary: null
pybids: Python package to access BIDS datasets
pykCSD: Object oriented Python kernel current source density toolbox
QSNMC: A collection of candidates, tests, and records for use with SciDash.
Scalable-Brain-Atlas: Source code of the Scalable Brain Atlas website (scalablebrainatlas.incf.org)
Vectorization-of-brain-atlases: Output of the GSOC project 'real time vectorization of brain atlases', see http://incf.org/gsoc/2014/real-time-vectorization-of-brain-atlases
WDAT: Web Data Analysis Tool
XCEDE: null
xnnppx: XNAT-NiPype-pyxnat

This work is supported by the National Institutes of Health's National Center for Advancing Translational Sciences, Grant Number U24TR002306. This work is solely the responsibility of the creators and does not necessarily represent the official views of the National Institutes of Health.