Common Workflow Language

Login: common-workflow-language

Company: null

Location: null

email:

Blog: http://www.commonwl.org

Members

  1. Andrey Kartashov
  2. Andrey Kislyuk
  3. Anton Khodak
  4. Bharath M Vasagam
  5. Brad Chapman
  6. Denis Yuen
  7. Farah Zaib Khan
  8. Gijs Molenaar
  9. Hervé Ménager
  10. Joshua C. Randall
  11. Kenzo-Hugo Hillion
  12. Luka Stojanovic
  13. Manvendra Singh
  14. Mark Robinson
  15. Michael R. Crusoe
  16. Nebojsa Tijanic
  17. Peter Amstutz
  18. Roman Valls Guimerà
  19. Stian Soiland-Reyes
  20. Tomoya Tanjo
  21. Toni Ru?a
  22. Ward Vandewege

Repositories

2015-bosc
Abstract and presentation material for the Bioinformatics Open Source Conference 2015
acd2cwl
CWL generator for ACD (EMBOSS) files
avro
Mirror of Apache Avro
ci.commonwl.org
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common-workflow-language
Repository for CWL Specifications. Use https://www.biostars.org/t/cwl/ for support.
common-workflow-language.github.io
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cwl2argparse
cwl2argparse generates an argparse definition from CWL tool arguments that can be pasted in a Python program and used
cwl2script
Compile CWL workflow to shell script
cwlavro
Auto-generated Avro classes for manipulating CWL (starting with Java). Works with v1.0
cwlcpp
Empty.. for now
cwljava
Java SDK for CWL
cwl-tes
cwl-tes submits your tasks to a TES server. Task submission is parallelized when possible.
cwltest
Framework for testing CWL tools and workflows
cwltool
Common Workflow Language reference implementation
cwl-upgrader
Upgrade CWL draft-3 syntax to v1.0 syntax
cwl-v1.1
In development version of the future CWL v1.1 specification
cwlviewer
A web application to view and share Common Workflow Language workflows
galaxy
Fork of Galaxy (http://galaxyproject.org/) attempting to implement the CWL spec.
galaxy2cwl
Converter from Galaxy tool XML to CWL CommandLineTool
governance
Holds public material generated by and for the CWL board.
GSoC
OBF Google Summer of Code
gxargparse
Automated CWL and Galaxy XML generation for Python tools that use argparse and click
hive-cwl-examples
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logo
CWL logo source
lwcwl
Lightweight CWL
pypi2cwl
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python-cwlgen
Generation of CWL programmatically. Available types: CommandLineTool and DockerRequirement
python-cwlmodel
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schema_salad
Semantic Annotations for Linked Avro Data
user_guide
The CWL v1.0 user guide
w3id.org
Website source code for w3id.org
wdl2cwl
Convert Workflow Definition Language (WDL) to CWL
workflows
Community maintained workflows & tools (with examples)
workflow-service
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This work is supported by the National Institutes of Health's National Center for Advancing Translational Sciences, Grant Number U24TR002306. This work is solely the responsibility of the creators and does not necessarily represent the official views of the National Institutes of Health.