Melbourne Bioinformatics

Login: melbournebioinformatics

Company: null

Location: Melbourne, Australia

email:

Blog: http://www.melbournebioinformatics.org.au/

Repositories

Analytics
Usage data analytics
bpipe-qiime_closed_otus
bpipe-qiime_pick_closed_otus
bpipe-trinotate
bpipe script to run the trinotate transcriptome annotation pipeline
datacarpentry_2015-11-23_VLSCI
null
django-audit-log
Audit log for your Django models
exome_variant_calling_pipeline-bpipe
null
galaxy-datatypes-talk
10 Minute Intro to Galaxy Datatypes
ggplotheatmap
An R package for making heatmaps with ggplot
karaage
Cluster account management tool
Karaage3-plugins-project-application
A Project Application plugin for Karaage3. Captures some basic extra information not in the current application process.
karaage-applications
User applications for Karaage.
karaage-cluster-tools
Karaage cluster management tools
karaage-hacks
Site specific Karaage hacks.
karaage-software
Software plugin for Karaage.
karaage-test
Debian packaging tests for Karaage 3.x
karaage-usage
Plugins to usage information for Karaage.
keps
Karaage Enhancement Proposals
learnggplot
Learning materials for ggplot
MelBioInf_docs
LSCC documentation in markdown format
MelBioInf_docs_test
Test github.io changes to MelBioInf_docs
OpenRefine-ecology
Lesson on OpenRefine for ecology
python-alogger
Library to parse cluster resource manager logs.
python-tldap
High level LDAP library with client side transaction support.
R-genomics
Lesson on data analysis and visualization in R for genomics
shell-genomics
Lesson for the shell for genomics
spank-private-tmp
Slurm spank plugin to give each job private /tmp (and/or other dirs)
spreadsheet-ecology-lesson
This repository contains Data Carpentry lessons on using spreadsheets for data wrangling.
test-github
An experimental repo to play with git and github features
variant_calling_pipeline
A simple variant calling and annotation pipeline using BWA, GATK and ENSEMBL. This version of the pipeline uses the Rubra/Ruffus framework in Python.
vlsci.github.io
null
website_user_docs
User documentation for VLSCI website
This work is supported by the National Institutes of Health's National Center for Advancing Translational Sciences, Grant Number U24TR002306. This work is solely the responsibility of the creators and does not necessarily represent the official views of the National Institutes of Health.