CD2H gitForager

NCI CBIIT Development Sandbox

Login: CBIIT

Company: null

Location: null

email:

Blog: http://cbiit.nci.nih.gov/

Members

Juli Klemm

Repositories

60plus.smokefree.gov: Smokefree 60+ repository
biad-front-end-portal: A resource for all things front-end
biad-front-end-portal: A resource for all things front-end
biomatch_prototype_angular: null
biomatch_prototype_angular: null
biomatch_prototype_api: null
biomatch_prototype_api: null
bridg-model: null
c3d-BTRIS-Extract: Extract code for the Biomedical Translational Research Information System
c3d-Extract: Used for the Extract of the C3D Effort
c3d-LabLoad: A Lab Loader tool for c3d
c3d-LabLoad-Interface: The interface for the Lab Load code
caaers: caAERS is a web application for recording and reporting adverse events that occur during cancer clinical trials
caaers-docs: This is the documentation repository for Cancer Adverse Event Reporting System (caAERS) project that is under the NCIP channel
cacore-sdk: The caCORE Software Development Kit (SDK) generates a system built on the principles of Model Driven Architecture (MDA), n-tier architecture and a common API for data access. When the caCORE SDK-generated system is combined with controlled vocabularies and registered metadata, the resulting software system, called "caCORE-like" system, is "semantically integrated."
cadsr-admin-tool: The caDSR Administration Tool is the main administrative interface to all of the basic editing and maintenance features and components of caDSR tools.
cadsr-api: The caDSR APIs allow developers to build an application to access caDSR metadata and search the database, or to retrieve caDSR Metadata to customize local data collection applications
cadsr-bulk-loader: The caDSR Bulk Loader uploads metadata from an Excel spreadsheet into the caDSR.
cadsr-cde-browser: The CDE Browser is the primary starting point for exploring the contents of the caDSR.
cadsr-cdecurate: The CDE Curation Tool supports creation and editing of Data Element Concepts, Value Domains, and Data Elements.
cadsr-db: This stores all the schema changes
cadsr-db-tree-master-scripts-meta-updateBeginEnd517: null
cadsr-formbuilder: caDSR Form Builder allows users to leverage Common Data Element (CDE) metadata to create forms that replicate the content of Case Report Forms (CRFs).
cadsr-formbuilder-refresh: Creating as per request NCI-RITM0064294
cadsr-objectcart: The caDSR Object Cart application provides shopping cart-type operations for caDSR data objects.
cadsr-password-change-station: The purpose of the caDSR Password Change Station is to allow users to set and reset the password used for logging in to the caDSR Tools.
cadsr-semantic-tools: The Semantic Integration Workbench (SIW) is a caCORE tool that assists users in adding consistent metadata to a UML model, or verifying consistency, by tagging their domain model with matching concepts from the NCI Thesaurus.
cadsr-sentinel: The caDSR Sentinel tool allows users to create and manage Alert Definitions for content in the caDSR
cadsr-services: null
cadsr-uml-model-browser: The caDSR UML Model Browser supports browsing and searching UML Models that have been transformed into caDSR metadata via the UML Loader
cadsr-util: caDSR Utils contains common utility libraries that are used by other caDSR related projects.
cagrid2: The caGrid2 project includes enhancements to the caGrid core services to support WS* and SHA2, which enables the National Cancer Informatics Platform's interoperability strategy.
cagrid2-wsrf: The caGrid2 project includes enhancements to the caGrid core services to support WS* and SHA2, which enables the National Cancer Informatics Platform's interoperability strategy.
cagrid-core: The caGrid core infrastructure project includes the caGrid core services and tooling, which enables the National Cancer Informatics Platform's interoperability strategy.
cagrid-docs: The caGrid-docs repository contains caGrid-related documentation, including Admin/Developer/User guides, design documents, and presentations.
cagrid-general: The caGrid-general repository contains third party libraries that are used commonly across the caGrid project.
camod: The cancer models database (caMOD) provides information about animal models for human cancer to the public research community.
camod-docs: This repository holds documents for the Cancer Models Database(caMOD) project under the NCIP channel.
cananolab: caNanoLab is a web-based portal designed to capture nanotechnology data.
caNanoLabTestAutomation: Automated test scripts for caNanoLab
cancer_control_website: Created as per request NCI-RITM0074349
CEC-Harmonization: null
cellminercdb: null
common-security-module: The Common Security Module (CSM) provides a comprehensive solution to common security objectives, with flexible delivery of security tools to allow application developers to integrate security with minimal coding effort. This helps eliminate the need for development teams to create their own security methodology. CSM provides solutions for authentication, authorization, and user provisioning.
common-security-module-docs: This repository holds documents for the Common Security Module (CSM) project under the NCIP channel. See https://github.com/NCIP/common-security-module for further information.
crs-knowledge-base: null
CSSIDCC: null
ctrp: CTRP 5.0/AUM
ctrp: CTRP 5.0/AUM
CTRP_4x_PA_Lightweight_Refresh: null
CTRP_4x_PO_Lightweight_Refresh: null
ctrp-bddtests: null
ctrp_datawarehouse_bddtests: For BDD tests for the Data Modernization Project
ctrp_datawarehouse_bddtests: For BDD tests for the Data Modernization Project
CTRP_DB_Refresh_Test: null
ctrp_docs: Repository for user documentation.
ctrp_docs: Repository for user documentation.
ctrp-etl: CTRP 5.0/AUM ETL
ctrp-etl: CTRP 5.0/AUM ETL
ctrp-fdaa-no_masking-update: FDAA Batch Create with three fields: study_protocol_id , nci_id and no_masking. This script loads the initial data for the Fdaa microservice database.
ctrp-fdaa-no_masking-update: FDAA Batch Create with three fields: study_protocol_id , nci_id and no_masking. This script loads the initial data for the Fdaa microservice database.
ctrp_import_bddtests: For the Behavioral Tests for the CTRP Import process
CTRP_JASPER: null
CTRP_JASPER: null
ctrp-po-pa-synch: null
ctrp-ui-redesign: null
ctrp-ui-redesign: null
drupal: Verbatim mirror of the git.drupal.org repository for Drupal core. Changes will not be pulled, and merge requests will not be accepted, if you want to contribute, go to Drupal.org:
drupal-multipurpose-theme: A Drupal theme used as a baseline for NCI websites.
drupal_nci_sso: null
ECP-CANDLE-Benchmarks: ECP-CANDLE Benchmarks
ECP-CANDLE-LeaderBoard: null
ECP-CANDLE-Supervisor: null
FCTC: null
FHH: This is the repository for the HTML5 version of the Family Health History Tool
FHH-Admin: null
FHH-HealthVault: null
frostrs.github.io: Learning about GitHub Pages.
GDCMVS: GDC Metadata Validation Service
hartmanph-temp: null
hints_website: null
HPC_DME_APIs: NCI High Performance Computing Data Management Services Common APIs
icrp: null
ISRS: Integrated Safety Reporting Services
ISRS: Integrated Safety Reporting Services
jdacs4c-data: null
jdacs4c-pilot1: null
jdacs4c-pilot2: Repository to support Pilot #2 of the JDACS Effort
jdacs4c-pilot3: Repository to support Pilot #3 of the JDACS Effort
kunkelm_adhoc: Created as per request NCI-RITM0069561
match-docker: Docker scripts for Match setup and deployment
mats-nih: null
migrate-postgres-to-redshift: null
migrate-postgres-to-redshift: null
Misteli-Lab-CCR-NCI: Collection of analysis scripts, workflows, (primary/secondary) data used in publications by Misteli Lab
MOIP: Mutation Of Interest Processor
MOIP: Mutation Of Interest Processor
national-biomedical-image-archive: The National Biomedical Imaging Archive (NBIA) is a free and open source service and software application that enables users to securely store, search, and download diagnostic medical images, providing a searchable national repository integrating in vivo cancer images with clinical and genomic data. Using role-based security, NBIA provides web-based access to de-identified DICOM images, image markup, annotations, and rich meta data.
NBIA-AUM: The National Biomedical Image Archive Application Update and Modernization
NBIA-Client: null
NBIA-TCIA: null
nci-analysis-tools-web-presence: Contains both the framework for exposing R functions as web services and websites and the R code itself
nci-bridg: The Biomedical Research Integrated Domain Group (BRIDG) Website
ncibusinessystemsmapping: null
nci-cbiit: A Drupal-based website for the Center for Biomedical Informatics and Information Technology (CBIIT).
nci-cbiitservice: The repository for the new public-facing CBIIT services website.
nci-cbiit-solutions: The repository for the new Drupal-based CBIIT Solutions website.
nci-cbiit-theme: The new Drupal theme as designed by the CBIIT communications team.
nci-cct-business-of-science: null
nci-cct-eventsreg: null
nci-cct-mentor: null
nci-cssi: null
nci-ctd2-dashboard: NCI CTD^2 Dashboard
nci-ctd2-dashboard-tmpl-helper: NCI CTD^2 Dashboard Template Helper
nci-ctrp-organization-api: POC for CTRP Organization API.
nci-ctrp-organization-api: POC for CTRP Organization API.
nci-dceg-melanoma-study: null
nci-docs-files: null
nci-drupal-modules: A library of vetted third-party contributed modules for Drupal.
nci-emice: The National Cancer Institute's website for electronic Models Information, Communication, and Education (eMICE).
nci-evs: A Drupal-based website for Enterprise Vocabulary Services (EVS)
nci-external-process-api: This repository contains RESTful services that runs external processes.
nci-external-process-api: This repository contains RESTful services that runs external processes.
nci-fdacfd: A Drupal-based website for the FDA's "Critical Path" Computational Fluid Dynamics (CFD)/Blood Damage Project.
nci-gene-trap: null
nci-govdelivery-integration: null
nci-hitif: null
nci-icbp: A Drupal-based website for the Interactive Cancer Biology Program.
nci-imat: null
nci-informatics-bddtests: null
nci-informatics-bddtests: null
nci-itcr: The NCI Informatics Technology for Cancer Research (ITCR) Website
nci-itcr-cab: nci-itcr-cab
NCI-LAN-Modernization: Project artifacts, workflow charts, and documentations for NCI LAN Modernization
nci-match-cli-sequence-file-uploader: API to work with Thermo Fisher's Ion Torrent suite VCF and BAM files uploaded to S3
nci-match-ir-ecosystem-api: Code that allows for NGS data to come into the NCI-MATCH system
nci-match-report-api: This repository contains the rest services to retrieve data about the match study.
nci-match-report-api: This repository contains the rest services to retrieve data about the match study.
nci-match-tableau-reports: null
nci-match-tableau-reports: null
nci-match-ui-bddtests: Holds Match UI BDD tests
nci-match-workflow-api: This repository contains the Matchbox workflow rest services.
nci-match-workflow-api: This repository contains the Matchbox workflow rest services.
nci-metastatic-niche: The website for the Metastatic Niche symposium, 2017, held at NCI.
nci-ncl: null
nci-ncs: A Drupal-based website for NCI Computer Services (NCS).
nci-occpr: null
nci-ocg-dcc: NCI OCG DCC Repository
nci-ocg-drupal: null
nci-provocativeqs: A Drupal-based website for the NCI Provocative Questions Initiative.
nci-provocativequestions: null
NCI-QIN-Pub: null
nci-remoteapps: A Drupal site for the Remote Apps website.
nci-sn-workflow-apps: null
nci-spl: A Drupal-based website for the Scientific Program Leaders meetings.
nci-systems-docker: This repository is for storing the nci cbiit related docker files
nci-systems-docker: This repository is for storing the nci cbiit related docker files
nci-systems-docker: This repository is for storing the nci cbiit related docker files
nci-systems-docker: This repository is for storing the nci cbiit related docker files
nci-systems-engineering: null
nci-systems-engineering-pub: null
nci-tools-dceg-classification: Standalone applications/tools that assist expert reviewers to further curate codes produced by the SOCcer web tool
nci-userinfo-api: null
nci-user-registration: null
nci-webtools-cancer-terms-api: RESTful service for glossary of cancer terms
nci-webtools-ccr-ccbr: CCR Bioinformatics Core
nci-webtools-ccr-microarray: null
nci-webtools-ccr-rs3d: null
nci-webtools-dccps-cedcd: CEDCD (part of CEC)
nci-webtools-dccps-seer: null
nci-webtools-dceg-age-period-cohort: null
nci-webtools-dceg-author-arranger: null
nci-webtools-dceg-classification: null
nci-webtools-dceg-econsent: NCI eConsent tool
nci-webtools-dceg-linkage: null
nci-webtools-dceg-ncidose: null
nci-webtools-dceg-nevus-recognition: null
nci-webtools-dceg-pathway-analysis: null
nci-webtools-dceg-perc: null
nci-webtools-dceg-pimixture: null
nci-webtools-dceg-risk-assessment: null
nci-webtools-dceg-sw-computational-tools: null
nci-webtools-docker-feasibility: null
nci-wetools-common: null
pcpreport: null
pipeline-as-code-demo: null
rcellminer: null
rcellminerData: null
rembrandt: REMBRANDT (REepository of Molecular BRAin Neoplasia DaTa) database was developed to allow analysis of data from molecularly characterized primary brain tumors and correlate those data with extensive retrospective and prospective clinical data.
research-to-reality: Repository for ResearchToReality.cancer.gov , a professional networking site for cancer researchers
SCM_Test: This is a test repository for the SCM Team
SCM_Test2: null
scm_test3: null
smokefree: smokefree.gov
SmokeFree-Women: null
springboard: springboard
stats-analysis: The purpose of Stats Analysis API is to allow programmatic and logical access to the underlying Data Mart via clinical genomic domain objects.
stats-analysis-commons: The Stats Analysis Commons API handles the messaging services between projects.
stats-analysis-server: The Stats Analysis Server performs on-the-fly statistical calculations for other applications.
stats-application-commons: The Stats Application Commons provides various utility functions such as mail server, scheduling, string manipulation, data download management, and caching functions.
teen.smokefree.gov: null
wiki-signup: null
ztest: null

This work is supported by the National Institutes of Health's National Center for Advancing Translational Sciences, Grant Number U24TR002306. This work is solely the responsibility of the creators and does not necessarily represent the official views of the National Institutes of Health.