Name: rcellminer
Owner: NCI CBIIT Development Sandbox
Description: null
Created: 2016-02-25 02:23:32.0
Updated: 2017-10-04 21:42:52.0
Pushed: 2017-11-21 15:46:42.0
Homepage: null
Size: 6716
Language: R
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This R package provide access to the data and functions to analyze data from CellMiner.
setRepositories(ind=1:6)
options(repos="http://cran.rstudio.com/")
if (!require("devtools")) install.packages("devtools")
source("http://bioconductor.org/biocLite.R")
if (!require("Biobase")) {
biocLite()
}
biocLite("BiocStyle")
library(devtools)
# Optional for interactive plots
install_github('rCharts', 'ramnathv')
install_github("cannin/rcellminer",
build_vignette=FALSE,
dependencies=TRUE,
args="--no-multiarch",
ref="master")
install_github("github/rcellminerData",
build_vignette=FALSE,
dependencies=TRUE,
args="--no-multiarch",
ref="master")
Open .Rproj file in RStudio
if (require("devtools")) install.packages("devtools")
setRepositories(ind=1:6)
library(devtools)
install_deps(".")
Open vignette (Rmd files) from vignettes/ folder and use “Knit HTML” button to generate the HTML file.