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Members

1. Ilkin Safarli
2. Ino de Bruijn
3. ?stemi Bahçeci
4. Selim F?rat Y?lmaz

Repositories

chied

A graph visualization tool for creating, editing and layout of compound or clustered graphs, as well as simple, flat graphs, in Java

chilat

Automatically exported from code.google.com/p/chied.improved-animation

chilay

Chisio Layout (ChiLay) provides a graph layout framework along with a number of layout algorithms implemented in Java. Layout services can be used locally or remotely (through HTTP) from a server.

chilay.maven-repo

Automatically exported from code.google.com/p/chilay.maven-repo

chise.js

A web application to visualize and edit the pathway models represented by SBGN Process Description Notation

chisio.js

null

chiweb

Web-based editing and layout tool for compound or hierarchically structured graphs

cose-lat

A tool for animation during CoSE layout to debug and improve the algorithm

cytoscape.js

Graph theory (a.k.a. network) library for analysis and visualisation (compatible with CommonJS/Node.js/Browserify/Webpack, AMD/Require.js, npm, Bower, jspm, Meteor/Atmosphere, jQuery, and plain JS/JavaScript)

cytoscape.js-autopan-on-drag

A Cytsocape.js extension to automatically pan when nodes are out of canvas bounds

cytoscape.js-clipboard

A Cytoscape.js extension to provide copy-paste utilities

cytoscape.js-compound-resize

null

cytoscape.js-context-menus

A Cytoscape.js extension to provide context menu around elements and core instance

cytoscape.js-edge-bend-editing

A Cytoscape.js extension enabling interactive editing of edge bend points

cytoscape.js-expand-collapse

A Cytsocape.js extension to expand/collapse nodes for better management of complexity of compound graphs

cytoscape.js-graphml

A Cytoscape.js extension to import from and export to GraphML format

cytoscape.js-graph-queries

Some advanced queries running on Cytoscape.js graph model as an extension

cytoscape.js-grid-guide

A Cytsocape.js extension to provide a framework for grid interactions such as grid lines and snapping to grid, and guidelines and snap support for alignment of nodes.

cytoscape.js-layout-demo

null

cytoscape.js-layvo

null

cytoscape.js-node-resize

A Cytoscape.js extension to provide grapples to resize nodes

cytoscape.js-sbgn-pd-layout

null

cytoscape.js-svg

null

cytoscape.js-synched

null

cytoscape.js-undo-redo

A Cytoscape.js extension to provide an undo-redo framework

cytoscape.js-view-utilities

A Cytoscape.js extension to provide miscellenaous view utilities such as hiding and highlighting nodes/edges

even

null

ivisplant-js

Analysis of Metabolite Correlations in Plants using Correlation Network Analysis

newt

A web application to visualize and edit pathway models represented in SBGN

pathway-mapper

An interactive and collaborative graphical curation tool for cancer pathways

sbgnviz-as

Cytoscape Web based visualization tool for process description maps in SBGN

sbgnviz-as.sampleapp

Sample app for SBGNViz.as

sbgnviz.js

A web based visualization tool for process description maps in SBGN

sbgnviz.js-sample-app

A sample application for SBGNViz