CD2H gitForager

Daniel Chen

Login: chendaniely

Company: Virginia Tech - @bi-sdal - GBCB

Location: New York, NY

Bio: bow ties are cool

Blog: http://chendaniely.github.io

Member of

Repositories

2014-02-25-swctest: test
2014-03-18-nyu: Software Carpentry NYU Intermediate Python
2014-06-24-ru: null
2014-08-11-wustl: null
2014-09-24-frb: null
2014-10-08-vbi: null
2014-11-07-harvard: Software Carpentry workshop at Harvard
2014-11-08-git-harvard: null
2014-11-21-talk-cumc-dbmi-hci: Talk on Open Science and Ebola for the Health Communication and Informatics Lab on 2014-11-21 at Columbia - Department of Biomedical Informatics
2014-11-csaph-r: null
2015-01-08-NIH: NIH Software Carpentry Workshop
2015-01-08-NIH-github: swc workshop lesson on git
2015-03-06-nyas-git: null
2015-04-01-wcmc: Software Carpentry workshop at Weill Cornell Medical College
2015-04-01-wcmc-git: null
2015-04-15-SPDC-shiny: Shiny Tutorial for SPDC
2015-04-25-rstatsnyc-ebola: null
2015-05-12-BUSM: Software Carpentry Workshop Website for Boston University School of Medicine
2015-05-12-BUSM-git: null
2015-05-27-sdal-git: null
2015-06-21-s2i2: null
2015-06-22-s2i2-git: http://guyrt.github.io/2015-06-21-s2i2/
2015-06-25-jhu: null
2015-06-25-jhu-git: http://chendaniely.github.io/2015-06-25-jhu/
2015-10-12-VirginiaTech: null
2015_11_23_GH_harvard: GitHub training at the CfA
2015-11-23-harvard: http://chendaniely.github.io/2015-11-23-harvard/
2015-11-23-harvard-git: Git lesson at Harvard: chendaniely.github.io/2015-11-23-harvard
2015-scipy-lightning-literate: Lightening talk at SciPy 2015 on Literate Programming
2015-scipy-lightning-mann-properties: Scipy 2015 Lightning talk about how I learned to use properties while writing my first Python package, MANN
2016-01-22-ndssl: null
2016-04-06-dib-git-intro: null
2016-04-06-dib-git-intro-intermediate: null
2016-04-08-rstatsnyc_testing: Talk on Testing for the NYC R conference
2016-04-13-dib-git-intermediate: DIB Git Training Part 2
2016-06-16-sdal_git: null
2016-07-sismid: Notes, code, and slides from SISMID 2016
2016-11-01-bi_symposium: Poster for the 2016 BI Research Symposium
2016-11-03-nsbe: SWC Workshop: NSBE Professional Development conference in Norfolk, VA
2016-11-03-nsbe-git: Intro Git Tutorial
2016-11-03-nsbe-workshop: Materials for the nsbe workshop
2016-pydata-carolinas-pandas: Material for Pandas Tutorial at Pydata Carolinas 2016
2016-pydata-dc-python_useRs: Python useRs talk for PyData DC 2016
2016-scipy-lightning-pandas_for_everyone: Lightening talk for Pandas for Everyone
2017-04-20-nyp_value_institute: null
2017-05-23-sdal_dspg_collaboration: DSPG Summer training for Git
2017-06-19-nasa-rm1: null
2017-06-26-meetup-r_you_markDown: null
2017-08-15-meetup-r_you_markDown: null
2017-08-23-stan_class: Learn Bayesian Data Analysis (BDA) and Markov chain Monte Carlo (MCMC) computation using Stan
2017-10-26-python_crash_course: null
2017-12-04-pandas_live: null
2017-bi_day_poster-doing_data_science: Bi Symposium Poster on Doing Data Science
2017-ohdsi: null
2017_ser_poster: Society for Epidemiologic Research 2017 Poster
2018-05-22-git_dspg: null
2018-05-30-dspg_git: null
2018-05-pandas_live: null
altair: Declarative statistical visualization library for Python
arch-docker: base arch-devel docker container
attitude-citation-network: Citation Networks of Attitude in the Social Science and Computer Science Space
awesome-R: A curated list of awesome R frameworks, packages and software.
bc: Template for Software Carpentry bootcamp site repository.
blog: Dark clean theme for jekyll
board: Holds public material generated by and for the SCF board.
bokeh: Interactive Web Plotting for Python
book_of_knowledge: SDAL Workshop Trainings in book form!
buckler: Go library and CLI for making Shields-style badges (PNG)
catsplainr: Makes a cat explain R things to you
cdcepi-zika-data_only: cdcepi zika data repository containing only the data files
checkpoint: Install R packages from snapshots on checkpoint-server
chendaniely.github.io: Perpetually under construction
citation-network-analysis: null
CiteSeerExtractor: null
citeseerx-citation-network: Methods to get citation information from CiteSeerX
collaborative-lesson-delivery: "10 Rules" paper on collaborative lesson delivery
collegiate_times_sentiment: null
Columbia-SSOL-Pseudo-Transcript: Generates a pseudo unofficial transcript through Columbia's SSOL system
columbia_students: Bootcamp for students of the columbia bootcamp to play with
communications: Press kit, boilerplate for grants, etc.
computational-project-cookie-cutter: A cookie cutter to set up a folder structure for a computational project
configR: R package to read in configuration files
construct_wiki_mock: null
csaph-python: Python Tutorials for CSAPH
cv: null
datacarpentry: Data Carpentry workshop materials
datasci_course_materials: Public repository for course materials for the Spring 2013 session of Introduction to Data Science, an online coursera course.
demgsa: null
divelog: SCUBA Divelog Stuff
django_tutorial: null
docker-ohdsi-omop-synpuf: A docker container that implemets the OMOP common data model with the SYNPUF open medicare dataset pre-loaded
documenter: null
dspg18_training: The stuff I typed in class
ebola: Data for the 2014 ebola outbeak in West Africa
edav: W4701 Exploratory Data Analysis and Visualization
epipy: Python tools for epidemiology
ETL-CMS: Workproducts to ETL CMS datasets into OMOP Common Data Model
family_stories: null
figure_animation_scripts: null
fluent_python: Coding through the book
flu-survey: Flu survey analysis
gbcb_seminar_presentation_1: null
geoscrapeR: R package that scrapes and contains geo data
ggvis: Interactive grammar of graphics for R
git_essentials: Repository to accompany "Git Essentials"
git-flight-rules: Flight rules for git - a work in progress!
gitignore: A collection of useful .gitignore templates
git_lesson: null
google_scholar_citation_network: null
here_here: I love the here package. Here's why.
highchartR: A htmlwidget wrapper around Highcharts and Highstock APIs
igraph_cheatsheet: null
ipyvega: IPython/Jupyter notebook module for Vega, and Vega-Lite, Polestar, and Voyager
IRkernel: R kernel for IPython
java-regression-pcalculator: Useful statistics helper functions
jsm_2018: null
knitr-child-document-example: null
knitr-examples: a collection of knitr examples
kolaczyk-statistical_analysis_of_network_data_with_r: Coding through Eric D. Kolaczyk and Gabor Csardi's Statistical Analysis of Network Data with R
learning-spark: Coding though the "Learning Spark" book
lens: null
libloadR: R package that handles loading and installing multiple libraries from an R script file
lifelines: Survival analysis in Python
linux_admin_notes: Learning to do my job
mann: Mother of all MANN
mann2: null
mann2_analysis: Analysis scripts for mann2 and mann2_simulations
mann2_simulations: null
mannAnalysisR: R package to run analyses for MANN
mann_assortativity_analysis: Mark's Assortativity Analysis for Book Chapters
mann_lit_review: Lit review for MANN paper
mann_paper: null
marked-toc: Generate a TOC (table of contents) for markdown files.
meetups: Presentations from meetups and conferences
mesa: Mesa is a agent-based modeling framework in Python
mike_survey: new survey based on adina/mike_survey
MissionHousing: US census data on housing in SF mission district area
MSF_PneumoniaVaccinePriceMap: Working map for Doctors Without Borders
multi-agent-neural-network: Multi Agent Neural Network (MANN)
multidisciplinary-diffusion-model-experiments: null
my_config: config and preference files around my system
my_super_awesome_project: amaginggggggggggggggggg
novice-julia: null
nteract: :notebook: Interactive literate coding notebook!
nycdatabikers.github.io: :rocket: A responsive Jekyll theme based on my personal internet site
open-coding-labs: Resources for the coding novices and aficionados alike.
pandas: Flexible and powerful data analysis / manipulation library for Python, providing labeled data structures similar to R data.frame objects, statistical functions, and much more
pandas_for_everyone: Repository to accompany "Pandas for Everyone"
pandoc_resume: The Markdown Resume
PathLinker: Connect the dots in networks.
planets: Investigate which planets are landable
pweave-child-document-example: null
pyabm: An agent-based modeling toolkit written in Python.
pybtex_playground: Playing around with the Pybtex library
pydata_london_2018_lightning: Lightning talk for PyData London 2018
pylens: Python wrapper for the light, efficient network simulator (LENS)
pypi_test: null
pystan: PyStan: Python interface to Stan
rCharts: Interactive JS Charts from R
RcppR6: Code-generation wrapping C++ classes as R6 classes
red-cross-2: American Red Cross Phase 2 DataCorps
rendR: RStudio Add-in to fix that pesky knitr button
repast-multi-agent-neural-network: Poorly Coded Masters Thesis; this has been reimplemented in the multi-agent-neural-network
reproducible_infrastructure_paper: null
revealjs: R Markdown Format for reveal.js Presentations
r-flight-rules: Flight rules for R
r_gis_cookbook: Cookbook for GIS related things in R
r-novice-inflammation: Software Carpentry introduction to R for novices using inflammation data.
rstatsnyc_2017-data_scientist: So you want to be a data scientist?
rstatsnyc_2018-data_science: Talk for the NYC R Conference 2018
rthreejs: Three.js widgets for R and shiny
scholar.py: A parser for Google Scholar, written in Python
scipy_2016_notes: null
scipy_2017_notes: Links and notes for SciPy 2017
scipy-2017-tutorial-pandas: SciPy 2017 Pandas Tutorial
scipy_proceedings: Tools used to generate the SciPy conference proceedings
sctyner.github.io: My website. Built with help from https://github.com/daattali/beautiful-jekyll#readme
scvt_website: Website for the SCUBA Club at Virginia Tech
sdal_configs: null
sdal_notes: null
shell-novice: Software Carpentry introduction to the shell for novices.
shiny_examples: null
shiny-official--tutorial: files from the official shiny tutorial
SISMID_MCMC_I: Teaching materials for MCMC I module in the Summer Institute in Statistics and Modeling in Infectious Diseases (SISMID)
site: Software Carpentry web site.
smoke_alarm_models: Models assisting Red Cross Home Fire Preparedness team target areas for smoke alarm installs. Predictions and indicators used in smoke_alarm_map repo.
spark_installation_arch: Directions on Setting up a Master and Slaves for Spark
sphinx-rtd-test: test repo to get sphinx documentation with read the docs
spring_2016_cs_5854-PathLinker: Code to develop PathLinker 2.0
sql_lesson: null
staged-recipes: A place to submit conda recipes before they become fully fledged conda-forge feedstocks
stat_5444g-bayesian_project: Final Project for STAT 5444G Applied Bayesian Statistics
Urbanscape: A food provider agent-based model for obesity
useful: a package of handy, useful functions
USMassShootings: Visualization of Mass Shootings in the USA from 2012 - Present
vax-sentiment-template: Template for Vaccine Sentiment Analysis
vbi-sdal-project-template: Creates folder template as described here: http://datawiki.fivehokies.com/dokuwiki/doku.php?id=sys:filestructure
web-of-science: null
website: Software Carpentry website
wicer-entice3: An Interdisciplinary Communication Tool to Support the Process of Generating Tailored Infographics From Electronic Health Data Using EnTICE3
wicer-entice3-grader: Repository to check responses from wicer-entice3
windows-installer: Software Carpentry installer for Windows.
workshop-template-empty: null
wos-citation-network: Methods to get citation information from Web of Science
zika: Data repository of publicly available Zika data
zika_dashboard_cdc: Shiny Dashboard for CDC Zika data
zika-data: Data ? and pointers to data ? related to the 2015?16 Zika virus outbreak.
zika_data_to_cdc: Converting various datasets to adhere to CDC Zika format
zonca.github.io: My blog

Commits To

Repository	Most Recent Commit	# Commits
chendaniely/docker-ohdsi-omop-synpuf	2015-05-19 18:25:35.0	1
chendaniely/2014-11-21-talk-cumc-dbmi-hci	2015-05-26 18:42:24.0	4
Duke-GCB/SciComp-Materials	2014-10-08 22:35:02.0	2
chendaniely/2017-ohdsi	2017-10-25 15:30:19.0	1

This work is supported by the National Institutes of Health's National Center for Advancing Translational Sciences, Grant Number U24TR002306. This work is solely the responsibility of the creators and does not necessarily represent the official views of the National Institutes of Health.