Kyle Ellrott

Login: kellrott

Company: null

Location: null

Bio: null

Blog:

Blog:

Member of

1. Global Alliance for Genomics and Health
2. UCSC Cancer Research

Repositories

agro

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ansible-galaxy-extras

Ansible roles to configure assorted compontents for an Ubuntu VM or container configured with https://github.com/galaxyproject/ansible-galaxy with production services including nginx, uwsgi, supervisor, protftp, and slurm.

bioblend

A python library for interacting with BioCloudCentral, CloudMan, and Galaxy API

biopython

Fork of biopython

bmeg_portal

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cgData

Python API to work with the cgData standard

ConvertPort

Create dynamic data conversion services for DekiWiki

cwljava

Java SDK for CWL

cwl-scala

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docker-galaxy-stable

Docker Images tracking the stable Galaxy releases.

docker-proxy

Proxy server for docker to apply request filtering

eval-framework

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faux_shift

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femto

tiniest possible code serialization protocol - transmit the AST directly

gaea

Focal point for gathering and analyzing biomedical evidence as a graph

galaxy

Data intensive biology for everyone.

galaxy-central

git repo tracking galaxy-central's mercurial repository (https://bitbucket.org/galaxy/galaxy-central)

galaxy-lib

Subset of Galaxy (http://galaxyproject.org/) core code designed to be used as a library.

galaxy_paradigm_web

Galaxy wrapper for Five3 Paradigm web service

galaxy_refine

Plugins to help connect Galaxy to OpenRefine

galaxy-tooldev-docs

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galaxy-warpdrive

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ggp-cwlrunner

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go-avro

Apache Avro for Golang

go.matrix

linear algebra for go

gopy

gopy generates a CPython extension module from a go package.

grid-framework

Mesos framework for Sun Grid Engine

gridlearn

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gwftool

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icgc_rnaseq_align

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incubator-spark

Mirror of Apache Spark

interval2matrix

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job-node-stalker-plugin

Jenkins plugin that when configured will make the job to run where the referenced job has ran on previous build

jobTree-mesos

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libdai

clone of Joris Mooij's libDAI at http://people.kyb.tuebingen.mpg.de/jorism/libDAI/

license

Master license, authors, contributors, etc... informations

mltest

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mutcall_wrapper

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nebula

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Paradigm

PAthway Representation and Analysis by Direct Inference on Graphical Models

PCAP-core

NGS reference implementations and helper code for the IGCG/TCGA Pan-Cancer Analysis Project

planemo

Command-line utilities to assist in developing tools for the Galaxy project.

planemo-machine

A packer.io configuration for building out Galaxy (http://galaxyproject.org/) tool development environments.

pomegranate

Fast, flexible and easy to use probabilistic modelling in Python.

psl-pathways

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pulsar

Distributed job execution application built for Galaxy

python-irodsclient

A python API for iRODS

rabix

Reproducible Analyses for Bioinformatics

Remus

Python driven pipeline engine

schemas

Work on data models and APIs for Genomic data.

SemanticNote

A plugin for the Mindtouch platform to enable semantic web notation

SMC-Het-Challenge-Eval

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SMC-RNA-Challenge

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spark

Mirror of Apache Spark

sparkgraph

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spark-gremlin

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spark_utils

spark related utilities

SparqlScape

Plugin for Cytoscape that integrates SPARQL queries for building graphs

synapseICGCSampleTracker

Sample tracking for ICGC/TCGA

synapsePythonClient

python client for the Synapse. Please visit https://synapse.sagebase.org/ for more information.

tcgaImport

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tcga_realign

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toil

Toil is a scalable, efficient, cross-platform pipeline management system, written entirely in Python, and designed around the principles of functional programming.

v8

A Go API for the V8 javascript engine.

Commits To