ngs-docs/2017-ucsc-metagenomics

Name: 2017-ucsc-metagenomics

Owner: ngs-docs

Description: Workshop materials for shotgun metagenomics

Created: 2017-04-18 21:10:29.0

Updated: 2018-01-04 07:27:01.0

Pushed: 2017-07-17 17:03:39.0

Homepage: https://2017-ucsc-metagenomics.readthedocs.io/en/latest/

Size: 21357

Language: Jupyter Notebook

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README

2017 / April / Metagenomics

This workshop was given on April 22nd and 23th, 2017 at the the Unveristy of California, Santa Cruz.. Instructors: Harriet Alexander, Phillip Brooks and C. Titus Brown TAs: Taylor Reitor and Shannon EK Joslin

See https://2017-ucsc-metagenomics.readthedocs.io/en/latest/ for the rendered version of this site.

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To look into:

• https://downloads.jbei.org/data/microbial_communities/MaxBin/MaxBin.html for binning
• https://github.com/DRL/blobtools - blobtools viz