cBioPortal/oncotree-mapping

Name: oncotree-mapping

Owner: cBioPortal

Description: null

Created: 2016-08-09 20:43:17.0

Updated: 2016-09-01 21:57:33.0

Pushed: 2017-09-18 15:20:35.0

Homepage: null

Size: 128

Language: Java

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README

Oncotree Mappings

This repository hosts the source code for Oncotree Mappings.

@author: Iker Huerga

Introduction

The Oncotree Mappings Service provides mappings from Controlled Vocabularies such as ICD9, ICD10 or SNOMEDCT to Oncotree

Let's take the following example

In the Controlled Vocabulary ICD10CM

 C92 - Acute Myeloid Leukemia

This service will return the equivalent code within the Oncotree Controlled Vocabulary

 AML - Acute Myeloid Leukemia
Installation

Oncotree Mappings is a simple Spring Boot Application

You have two ways of deploying it

1- Within an existing Servlet Container, such as Tomcat 7. Just execute the command below and copy the war file in your container's webapp directory

clean package

Then your service will be available here

2- Using Spring Boot's Embedded Servlet Container. Just execute the following command

spring-boot:run

Then your service will be available here


This work is supported by the National Institutes of Health's National Center for Advancing Translational Sciences, Grant Number U24TR002306. This work is solely the responsibility of the creators and does not necessarily represent the official views of the National Institutes of Health.