Name: hackseq_projects_2016
Owner: hackseq
Description: null
Created: 2016-06-13 14:53:27.0
Updated: 2017-08-04 12:17:41.0
Pushed: 2016-09-05 19:18:54.0
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README
Hackseq Projects 2016
- Project 1
Implement an evaluation framework for software that manipulates HGVS-formatted variants
- Project 2
Design a tool to optimize the parameters of any command line tool
- Project 4
Pseudo-WGS variant calling for common cell types aggregating ChIP-seq, RNA-seq and DHS from ENCODE and Roadmap Epigenomics data
- Project 5
A framework to evaluate profiles from DNA-binding site collections represented in peak sequences from ChIP-Seq assays
- Project 6
Inferring sex chromosome and autosomal ploidy in NGS data
- Project 7
Visualization of single cell RNA-seq data from tens of thousands of cells in real time
- Project 8
Explore the use of 10x Genomics' Linked-Reads to unlock currently inaccessible parts of the genome
- Project 9
Selection of tag SNPs for an African SNP array by LD and haplotype based methods
- Project 10
Develop an open-source, automated pipeline to close bacterial genomes with long read technologies
