LUMC/sentinel

Name: sentinel

Owner: Leiden University Medical Center

Description: JSON-based QC database for NGS statistics

Created: 2016-05-12 15:45:07.0

Updated: 2016-05-12 15:52:29.0

Pushed: 2016-09-05 07:09:13.0

Homepage: null

Size: 2737

Language: Scala

GitHub Committers

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Other Committers

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README

Sentinel

Sentinel is a JSON-based database for next-generation sequencing statistics. Queries and submissions are all done via a RESTful HTTP API which is specified based on Swagger.

Requirements

• Java 8 (must be set as the default java)
• Scala 2.11.6
• MongoDB 3.2 (running on localhost port 27017 for live development server)
• Python 2.7 and Sphinx (only when building the documentation)

If MongoDB 3.2 is not available in your official package repository, you can install it from the vendor's repository following the instructions here.

Support

Report issues to the issue page. Fixes and feature suggestions are also welcome.