Leiden University Medical Center

Login: LUMC

Company: null

Location: Leiden, The Netherlands

email:

Blog: http://www.lumc.nl/

Members

1. Ivo Fokkema
2. Jeroen F.J. Laros
3. Mark Santcroos
4. Wibowo Arindrarto
5. null

Repositories

ansible-role-galaxy_docker

null

bioconda-recipes

Conda recipes for the bioconda channel.

django

The Web framework for perfectionists with deadlines.

django-fsm

Django friendly finite state machine support

docker_ubuntu_gridengine_drmaa

For building a docker image on Ubuntu with Grid Engine, DRMAA, and miniconda installed.

galaxy-launcher

A project to launch the galaxy docker image easily using ansible

gitlabhq

Project management and code hosting application. Follow us on twitter @gitlabhq

kMer

Analysis toolkit and programming library for k-mer profiles (obsoleted by kPAL)

kPAL

Analysis toolkit and programming library for k-mer profiles

LOVD3

Repository is obsolete

lumc-galaxy-tools

Tools developed for use on LUMC's galaxy instance

Nanopublication

null

ribosome-profiling-analysis-framework

Ribosome profiling analysis framework as described in de Klerk E., Fokkema I.F.A.C et al (2015). Alignment, triplet periodicity analysis, detecting ORFs.

sentinel

JSON-based QC database for NGS statistics

singularity-recipes

Recipes for singularity containers used by LUMC analysis pipelines

vep2lovd

Annotate, filter, and convert VEP-annotated VCFs to LOVD+ format.