compomics/colims

Name: colims

Owner: Computational Omics and Systems Biology Group

Description: A lims system to automate and expedite proteomics data management, processing and analysis.

Created: 2015-03-30 12:38:23.0

Updated: 2016-12-08 13:59:35.0

Pushed: 2017-11-20 13:11:42.0

Homepage:

Size: 247163

Language: APL

GitHub Committers

UserMost Recent Commit# Commits
Tim te Beek2013-04-08 20:44:29.03
Niels Hulstaert2018-03-01 14:36:37.0783
Davy Maddelein2015-08-06 09:41:54.074
KennethVerheggen2014-01-14 12:46:40.094
demetturan2018-02-14 13:55:44.0115

Other Committers

UserEmailMost Recent Commit# Commits
Niels Hulstaert2014-03-19 12:15:11.02
compomicscompomics@sloeber6.ugent.be2014-09-12 12:45:15.02
Iain Buchananiain.buchanan@ugent.be2015-09-18 11:06:04.076
tbeektbeek@cmbipc722013-02-19 14:14:28.03
tbeektim.te.beek@nbic.nl2013-03-27 16:27:32.037
tbeektim.te.beek@nbic.nl2013-03-27 16:27:32.037

README

colims


Project Description

The CompOmics LIMS system, designed as the next-generation version of the ms_lims system, including much more powerful processing and analysis tools, and sporting a fully self-contained, freely available system for end-to-end mass spectrometry based proteomics identification pipelines.

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Downloads

Download the colims client here and the colims storage module here. Go to the ActiveMQ home page for the latest version of ActiveMQ (Windows or Linux).

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Usage

See the wiki for additional information on how to setup, run and configure colims.

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Project Funding

Colims has been developed as part of the ProteomeXchange Infrastructure project of the 7th Framework Programme of the European Commission, funded under contract number 260558.

| ProteomeXchange | 7th Framework Programme | European Commission | |:–:|:–:|:–:| http://www.proteomexchange.org/ | http://cordis.europa.eu/fp7/home_en.html | http://ec.europa.eu/index_en.htm |


| IntelliJ | Netbeans | Java | Maven | |:–:|:–:|:–:|:–:| | intellij | netbeans | java | maven |

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This work is supported by the National Institutes of Health's National Center for Advancing Translational Sciences, Grant Number U24TR002306. This work is solely the responsibility of the creators and does not necessarily represent the official views of the National Institutes of Health.