Name: brranching
Owner: rOpenSci
Description: I can haz all the phylogenies
Created: 2015-02-02 16:31:55.0
Updated: 2017-01-19 08:44:56.0
Pushed: 2017-12-16 01:23:14.0
Size: 2447
Language: R
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R client to fetch phylogenies from many places
To be included, with the associated function prefix:
phylomaticStable CRAN version
all.packages("brranching")
Or dev version
all.packages("devtools")
ools::install_github("ropensci/brranching")
ary("brranching")
<- c("Poa annua", "Phlox diffusa", "Helianthus annuus")
<- phylomatic(taxa=taxa, get = 'POST')
(tree, no.margin=TRUE)
You can pass in up to about 5000 names. We can use taxize to get a random set of plant species names.
ary("taxize")
<- names_list("species", 200)
<- phylomatic(taxa = spp, get = "POST")
(out, show.tip.label = FALSE)
brranching in R doing citation(package = 'brranching')