bioperl/Bio-ASN1-EntrezGene

Name: Bio-ASN1-EntrezGene

Owner: BioPerl

Description: ASN1 parser for EntrezGene data

Created: 2013-09-09 15:53:31.0

Updated: 2017-09-15 08:45:46.0

Pushed: 2017-02-03 13:04:40.0

Homepage: null

Size: 57

Language: Perl

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README

Bio-ASN1-Entrezgene

This distribution includes:

1. XML parser-like parser for the ASN.1-formatted NCBI Entrez Gene files.
2. Indexer for Entrez Gene files.
3. XML parser-like parser for the ASN.1-formatted NCBI Sequence files.
4. Indexer for Sequence files.

These modules have quite high performance and error reporting capabilities. Additionally, one could dump the data structure generated from extracted NCBI object records into XML extremely easily using XML::Simple's XMLout().

COPYRIGHT

Written by Dr. Mingyi Liu mingyiliu@gmail.com. Copyright (c) 2005 Mingyi Liu, GPC Biotech, Altana Research Institute.

This program is free software - you can redistribute it and/or modify it under the same terms as Perl itself.

INSTALLATION

Bio::ASN1::EntrezGene package can be installed and tested as follows:

dzill test # or dzil test --all
dzil install

DOCUMENTATION

For documentation, among many other things, please refer to the POD ( plain old documentation) inside the module.

It is highly recommended that you check the example scripts out (under the examples directory)!

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This distribution is part of the BioPerl project.