BioPerl

Login: bioperl

Company: null

Location: null

email: bioperl-l@bioperl.org

Blog: http://bioperl.org

Members

1. Aureliano Bombarely
2. Brian Osborne
3. Carnë Draug
4. Chris Fields
5. Chris Mungall
6. Christian Zmasek
7. Daisie Huang
8. Duke Leto
9. Florent Angly
10. Francisco J. Ossandon
11. Hilmar Lapp
12. Jason Stajich
13. Jay Hannah
14. Kai Blin
15. Lincoln Stein
16. Paul Cantalupo
17. Scott Cain

Repositories

Bio-ASN1-EntrezGene

ASN1 parser for EntrezGene data

Bio-Assembly

BioPerl assembly-related modules

Bio-Biblio

Bio-Biblio

Bio-Community

Modules for community biology

Bio-Coordinate

null

Bio-Das

null

Bio-EUtilities

Low-level OO Perl interface for NCBI's eutils

Bio-Event

null

Bio-Factory

null

Bio-FeatureIO

Sequence Feature streams

Bio-Microarray

Initial repository for microarray-based tools (may be renamed)

bioperl-cookbook

Cookbook for BioPerl (out-of-date)

bioperl-corba-client

BioPerl CORBA client (defunct)

bioperl-corba-server

BioPerl CORBA server (defunct)

bioperl-das-client

DAS Client

bioperl-db

BioPerl BioSQL ORM

bioperl-dev

Experimental (developer-only) BioPerl Code

bioperl-docker

Docker files for BioPerl

bioperl-ext

XS-based BioPerl extensions to C libraries (defunct)

bioperl.github.io

The BioPerl Web site: http://bioperl.org

bioperl-gui

Tk-based widgets for BioPerl (defunct) - this was for Genquire a c2000 project

bioperl-live

Core BioPerl 1.x code

bioperl-live-redmine

Legacy tickets migrated from the OBF Redmine issue tracker: http://redmine.open-bio.org

bioperl-microarray

Microarray-based tools (defunct)

bioperl-network

Analysis of protein-protein interactions

bioperl-papers

BioPerl-specific publication-related data

bioperl-pedigree

Linkage analysis research

bioperl-pipeline

Analysis pipelines from wrappers

bioperl-pise

Original Pise-based wrappers for BioPerl (obsolete)

bioperl-run

BioPerl wrappers

Bio-Range

BioPerl 2.x modules for representing coordinate ranges

Bio-Root

DEPRECATED: split repository for Bio-Root modules.

Bio-SearchIO-blastxml

BLASTXML modules for BioPerl

Bio-SearchIO-Writer-BSMLResultWriter

BioPerl BSML BLAST Result Writer

Bio-Staden-iolib

Perl XS bindings to Staden's io_lib

Bio-Tools-HMM

BioPerl tools for Hidden Markov Model analysis

Bio-Tools-Phylo-PAML

bioperl interface to PAML (Phylogenetic Analysis by Maximum Likelihood)

Bio-Tools-Run-Alignment-Clustalw

null

Bio-Tools-Run-Alignment-TCoffee

null

Bundle-BioPerl

Simple Bundle module for BioPerl

dist-zilla-pluginbundle-bioperl

Dist::Zilla plugin bundle for Bioperl distributions

html

Old BioPerl page backups (defunct)

p5-bpwrapper

BioPerl scripts and utilities

task-manager

null

xml-html

null