Name: loinc2hpo
Owner: Monarch Initiative
Description: Java library to map LOINC-encoded test results to Human Phenotype Ontology
Created: 2017-12-07 09:14:11.0
Updated: 2018-01-08 22:23:35.0
Pushed: 2018-01-10 23:11:56.0
Homepage: null
Size: 8119
Language: Java
GitHub Committers
| User | Most Recent Commit | # Commits |
|---|---|---|
| Peter Robinson | 2018-03-12 20:59:13.0 | 22 |
| kingmanzhang | 2018-03-20 20:30:58.0 | 179 |
Other Committers
| User | Most Recent Commit | # Commits | |
|---|---|---|---|
| pnrobinson | annas0ph1e | 2018-01-10 17:39:12.0 | 22 |
| Daniel Danis | daniel.danis@jax.org | 2018-02-28 11:59:41.0 | 8 |
| pnrobinson | peter.robinson@charite.de | 2017-12-12 01:48:42.0 | 9 |
Java library to map LOINC-encoded test results to Human Phenotype Ontology There are current two modules. loinc2hpogui is a JavaFX app that intends to help with biocuration of LOINC code to HPO term mappings. To build and run the GUI, use the following command.
n clean package
va -jar loinc2hpogui/target/Loinc2HpoGui.jar
To run the library code, enter the following
va -jar loinc2hpo-core/target/Loinc2HpoLib.jar download
This will download the hp.obo file (You need to manually download the LOINC Core Table file). There is a demo function that currently doesn't do anything
va -jar loinc2hpo-core/target/Loinc2HpoLib.jar demo