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Login: LANL-Bioinformatics

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Members

1. Chien-Chi Lo
2. null

Repositories

ADEPT

ADEPT is the only tool to date that dynamically assesses errors within reads by comparing position-specific and neighboring base quality scores with the distribution for the dataset being analyzed.

DETEQT

Diagnostic targeted sequencing adjudication

DETEQT

Diagnostic targeted sequencing adjudication

DETEQT

Diagnostic targeted sequencing adjudication

DETEQT

Diagnostic targeted sequencing adjudication

EDGE

EDGE is a highly adaptable bioinformatics platform that allows laboratories to quickly analyze and interpret genomic sequence data.

FaQCs

Quality Control of Next Generation Sequencing Data

GOTTCHA

Accurate read-based metagenome characterization using a hierarchical suite of unique signatures. Please visit our homepage:

MeGAMerge

MeGAMerge (A tool to merge assembled contigs, long reads from metagenomic sequencing runs)

PhaME

Given a reference, PhaME extracts SNPs from complete genomes, draft genomes and/or reads. Uses SNP multiple sequence alignment to construct a phylogenetic tree. Provides evolutionary analyses (genes under positive selection) using CDS SNPs.

rMoore

Moore genome citation tracker