InterMine

Login: intermine

Company: null

Location: Cambridge, UK

email:

Blog: http://www.intermine.org

Members

  1. Adriįn Bazaga
  2. Aman Dwivedi
  3. Daniela Butano
  4. Julie Sullivan
  5. Sam Hokin
  6. sergio contrino
  7. Vivek Krishnakumar
  8. Yo Yehudi
  9. null

Repositories

accountant-fragments
ClojureScript navigation for single-page applications, made simple.
apps-a-middleware
A Node.js reference implementation of a middleware for loading and rendering Apps
apps-b-builder
A component.io based builder for making JS packages
BiocStickers
Stickers for some Bioconductor packages - feel free to contribute and/or modify.
biotestmine
An example InterMine - for demoing and testing
blad
A forms based Node.js CMS
blog-container
A dockerized version of wordpress.
bluegenes
A friendly next-generation interface for Genomic data discovery powered by InterMine
bluegenes-old
Retired. Visit BlueGenes instead
bootstrap-material-design
Material design theme for Bootstrap 3 and 4
bosc-2018
materials for the bosc 2018 training workshop
bosc-abstracts
BOSC abstracts for InterMine projects
buildreports
A very small app for storing build reports.
ccbi-site
CCBI site on Blaš CMS
CDN
JavaScript, Cascading Style Sheet Content Delivery Network
cross-intermine-search-tool
Google Summer of Code 2018 Project under the Intermine community
crossmodel
crossmodel.org site
dagify
Render DAGs in interesting ways
demeter
A data-harvester for biological sources
design-materials
A collection of paper diagrams, presentations, sketches, Photoshop designs and websites for InterMine
docker-intermine
docker for intermine
DojoTreeBrowser
Proof of concept for ajax-based query builder
dokku
Docker powered mini-Heroku in around 100 lines of Bash
experimental-mines
Collection of experimental mines
facetted-query-builder
A facetted query builder.
flymine
FlyMine - an InterMine instance with Drosophila data
flymine-bio-sources
Data sources for FlyMine
flymine-table-styles
null
GMOD-RPC-Adaptor
Adaptor for processing GMOD-RPC calls as InterMine webservice requests
GMOD-RPC-InterMine
InterMine's GMOD-RPC modules
go-intermod
null
grunt-apps-c
CoffeeScript, JavaScript, JSON, Eco, Mustache as CommonJS/1.1 Modules
gsoc
InterMine GSoC informational mini-site for gsoc mentors and students
humanmine
HumanMine - an InterMine with human genomic data
humanmine-bio-sources
Data sources for HumanMine
im-ant-tasks
ant build tasks
imcljs
null
im-docs
Documentation for the InterMine project
imjs
InterMine Generic WebService Client Library
im-runnable
Learn you some InterMine Web Services for good
im-tables
Dynamic Result Table Library
im-tables-3
null
intermine
A powerful open source data warehouse system
intermine-accordb
Compare HomoloGene, OrthoDB and Panther datasets
intermine-android
Android native InterMine search app - search across multiple InterMines at once!
intermine-api-loader
Simplify loading of JS and CSS dependencies
intermine-apps-a
Apps provided by InterMine
intermine-apps-c
InterMine apps built using Bower and Grunt
intermine-bio-sources-old
Data parsers not in use
InterMine-Data-Browser-Tool
Just a prototype for the InterMine data browser project of genomic data. GSoC2018 project
intermine-dataset-registry
null
intermine-embedding-examples
InterMine Web Services demos and examples through the use of imjs or widgets.
intermine-gigs
Meetings InterMine members have attended.
intermine.github.io
Homepage for intermine.org
intermine-homepage-2017
planning for new intermine homepage
intermine-ios
Intermine iOS application - developed as part of GSoC 2017 by Nadia Yudina
intermine-items.pl
null
intermine-items.pl
null
intermine-like-run
The runtime components of the InterMine similarity search engine.
intermine-list-widgets
Client for embedding InterMine widgets (ws_widgets)
intermine-nlp
Natural language query parsing for Intermine
intermine-performance-test
A program to test the data loading speed for InterMine
intermine-perl-api
Items generation library, written in Perl
intermine-items.pl
null
intermine-items.pl
null
intermine-python-ws-demo
A demo webapp using InterMine web services to query model organism data.
InterMineR
R package for InterMine
intermine-registry
Registry to store and browse all known instances of InterMine. Entirely developed during Google Summer of Code 2017 by Leonardo Kuffo
intermine-report-widgets
A node.js reference implementation of a service for loading and rendering Report Widgets (Displayers).
intermine-scripts
All scripts that used to be in the main intermine repository in bio/scripts and intermine/scripts
intermine-search-drupal
Drupal module to enable searching a mine instance using InterMine Search API
intermine-steps
InterMine 2.0 Prototype preserving history of Steps
InterMine-Trac-Theme
http://intermine.org
intermine-user-docs
Documentation for using an InterMine webapp.
intermine-ws-bio-python
Bio Extensions for the Python WS client
intermine-ws-bio-ruby
Bio Extensions for the Ruby WS client
intermine-ws-java
Java client for InterMine
intermine-ws-perl
InterMine WebService Client Library
intermine-ws-python
InterMine Client library in python
intermine-ws-python-docs
Tutorials for the InterMine Python web client
intermine-ws-ruby
Ruby InterMine client
InterMOD-Logo
A logo for the InterMOD project
intermod-site
InterMOD site on Blaš CMS
iodocs
Fork Of Mashery's IODocs project
itemsxml.py
Items generation library, written in python
like
Recommendation engine
ListBasedQueryBuilder
A query bulder based on navigating from list to list
metabolicmine
an archived version of metabolicmine's webapp
metabolicmine-sources
the data sources used by metabolicmine
metabolicmine-tour
null
micklem-lab-site
Micklem Lab site on Blaš CMS
mine-comparisons
Dynamic comparisons of mines
mine-manager
a tool to create an InterMine instance
mineversions
Mini JS app to report versions of known mines
MineViewer
A Perl webapp for viewing data in InterMine datawarehouses
modencode-site
Homepage for the modENCODE project
neo4j
Project to develop Neo4j as the backing store for InterMine
neo4j-benchmark
null
outreach
Repo for ideas and community discussions about InterMine-related outreach and communities
RatPortal
A Web-Servicer based version of RGD portal pages
science-festival
Materials for an "Open Science is Better Science" themed science festival activity.
secretary
A client-side router for ClojureScript.
similarity
similarity
staircase
The webapp serving intermine steps
standard-model
staging place for extensions of intermine 'core' model (standard data model)
steps-ontology-tool
null
TreeSearchAutoComplete
Query Builder Demo with Autocompleting paths
webservices-tutorial
A set of tutorials for InterMine web services
This work is supported by the National Institutes of Health's National Center for Advancing Translational Sciences, Grant Number U24TR002306. This work is solely the responsibility of the creators and does not necessarily represent the official views of the National Institutes of Health.