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Jacki Buros Novik

Login: jburos

Company: null

Location: Brooklyn, NY

Bio: null

Blog:

Member of

Hammer Lab

Repositories

aocs-survival-analysis: null
bayesNMF: Testing bayesNMF code from the Broad
bda-meetup: Slides presented at the Bayesian Data Analysis meetup in NYC: Survival Modeling in Stan
bioconductor-abstract-2016: null
biostan: Materials for BioC-2016 workshop entitled "Introduction to Bayesian Inference using Stan with Applications to Cancer Genomics"
biostan-examples: null
cookiecutter-cohort: null
coveralls-python: Show coverage stats online via coveralls.io
docker-stacks: Opinionated stacks of ready-to-run Jupyter applications in Docker.
dygraphs: R interface to dygraphs
evaluate-biomarkers: Various methods for evaluation of biomarkers for clinical efficacy
example-using-stan-jm: Worked examples using stan-jm code on public datasets
explore-GP-models: Testing code for GP model exploration using Stan
googleComputeEngineR: An R interface to the Google Cloud Compute API, for launching virtual machines
GoogleVis: Working copy of GoogleVis, some mods
infino: null
infino-docker: Development environment for infino.
IRkernel: R kernel for Jupyter
jburos.github.io: null
luigi: Luigi is a Python module that helps you build complex pipelines of batch jobs. It handles dependency resolution, workflow management, visualization etc. It also comes with Hadoop support built in.
mutsigNMF: null
nbutils: Utilities for working with Jupyter notebooks
packrat: null
pander: An R pandoc writer
power-analyses: Results from doing various power-analyses using R
PredictiveAnalysisWithR: null
pyfscache: A simple filesystem cache for python.
query_tcga: Helper function for querying & downloading TCGA data from GDC
reticulatedf: Utilities for converting pandas.DataFrame to an R data.frame using reticulate
rq: Simple job queues for Python
rq-dashboard: Flask-based web front-end for monitoring RQ queues.
rstanarm: null
rstanarm-jm-issues: Issues & feature requests for JM branch of rstanarm
rstan-docker: Dockerfile for jackinovik/rstan-complete
rstanjm: Bayesian joint longitudinal and time-to-event models via Stan
sample_size: Power calculations for a particular analysis
setup-rstan: Testing setup of Rstan
simjm: Simulate Joint Longitudinal and Survival Data
simsurv: Simulate Survival Data
stan-group-1: Your favorite AnchorCMS theme, now for Jekyll!
stan-survival-shrinkage: Bayesian linear survival analysis with shrinkage priors in Stan
survivalstan: Library of Stan Models for Survival Analysis
survivalstan-examples: Notebooks illustrating usage of survivalstan with example models
test-packrat-restore: null
test-slidify-to-pdf: null

Commits To

Repository	Most Recent Commit	# Commits
jburos/biostan	2016-06-29 21:38:22.0	57
hammerlab/tcga-blca	2016-09-27 20:41:05.0	82
jburos/query_tcga	2017-04-04 22:54:06.0	47

This work is supported by the National Institutes of Health's National Center for Advancing Translational Sciences, Grant Number U24TR002306. This work is solely the responsibility of the creators and does not necessarily represent the official views of the National Institutes of Health.