Mad Price Ball

Login: madprime

Company: Open Humans Foundation

Location: San Diego, California

Bio: Executive Director of Open Humans Foundation & Shuttleworth Fellow

Blog: http://www.madeleineball.net

Blog: http://www.madeleineball.net

Member of

1. Church Lab
2. Harvard Personal Genome Project
3. Open Humans Foundation

Repositories

2014_summer_project

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American-Gut

American Gut open-access data and IPython notebooks

bigquery-examples

Example BigQuery integrations. Includes both sql and R wrappers.

cgivar2gvcf

Lossy conversion of Complete Genomics var file to VCF

clinvar-report

Generate a report based on the ClinVar variant database

comprehensive_ethics_bundle

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dataxfer

POC to develop a web-based data transfer tool from Nightscout dbs to other platforms

django

The Web framework for perfectionists with deadlines.

django-allauth

Integrated set of Django applications addressing authentication, registration, account management as well as 3rd party (social) account authentication.

django_celery_fileprocess_example

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django-get-evidence

Django rewrite of GET-Evidence

django_study_enrollment

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exploretree

A tree rendering program for Processing.org

gedankenstuecke.github.com

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genevieve

Genevieve genome report tool

gennotes

GenNotes shared genetic variant notes

get-evidence

Genotype + Environment = Trait Evidence (GET-E) Database: help the Personal Genome Project, the clinical genetics community, and, the general public interpret individual genomes.

jupyter-gallery

Share & re-use Jupyter Notebooks

madprime.github.io

Personal website

mbta-traffic-vis

Visualization of MBTA traffic data

MSCC-Reads-Processing

Code for handling Methyl-sensitive Cut Counting (MSCC) sequencing data

oh-23andme-source

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oh-app-demo

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oh-data-demo-template

Template and working demo for adding data to an Open Humans project. Python 3; Django 2.

oh-data-source-template

Template/Demo Django + Celery app you can use to create an OAuth2 data source activity for Open Humans.

oh_data_uploader

A simple to use template for uploading files to Open Humans

oh-jawbone-source

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ohjh-example-notebooks

Explore your personal data with https://notebooks.openhumans.org

oh-proj-management

Draft web app Open Humans projects can use to view and work with members and data

open-humans

Powering openhumans.org

open-humans-api

Tools to work with our APIs.

open_humans_data_extraction

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open-humans-downloader

a batch downloader for public Open Humans data

open-pokemon-go-go-go

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outreachy

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pettishun

Example "petition" Django web app

pgp_survey_analysis

Code for parsing Personal Genome Project survey data

python-gedcom

Python module for parsing, analyzing, and manipulating GEDCOM files

requests-respectful

Minimalist Requests wrapper to work within rate limits of any amount of services simultaneously. Parallel processing friendly.

scrape-huid-from-coriell

Scrape PGP huID's from Coriell's website

shuttleworthfoundation.org

Shuttleworthfoundation.org site made with Jekyll

surveys2openhumans

script to upload CSV survey data as JSON files to Open Humans project member accounts

sympy

A computer algebra system written in pure Python

trait-o-matic

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twitter-analyser

export data from twitter archive and visualize it

twitterlytic

Analyze following/followers for gender stats

vcf2clinvar

Match a personal genome VCF datafile to ClinVar

wikipedia_squish

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wikipop

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Commits To