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S�bastien Boisvert

Login: sebhtml

Company: Gydle Inc.

Location: Quebec City

Bio: I like biology, genetics, software development (C++ 2011) and using good tools (Spacemacs/Emacs, Valgrind, LTTng-UST).

Blog: http://twitter.com/sebhtml

Member of

Open City

Repositories

454-pairs: 454-pairs
accumulo-tests: null
Amazon-750h-free-test: null
amr-search: null
argobots: null
assemblathon-2-ray: Stuff for Assemblathon 2
assembly: Placeholder repo for quality assurance of commit history.
aws-ruby-scripts: null
babeltrace: This repo is a mirror of the official babeltrace git found at git.efficios.com/babeltrace.git. The Babeltrace project provides trace read and write libraries, as well as a trace converter. Plugins can be created for any trace format to allow its conversion to/from another trace format.
BEETL: BEETL
BioActors: null
biosal: biosal is a distributed BIOlogical Sequence Actor Library.
bwa: Burrow-Wheeler Aligner
calcul-quebec-build-scripts: null
cloudbiolinux: CloudBioLinux: configure virtual (or real) machines with tools for biological analyses
collision-engine: A 3-dimentional collision engine written in C++ using the Simple DirectMedia Layer and OpenGL.
colosse-tools: Tools for usage of Compute Canada's colosse.clumeq.ca
cooprouelibre-StarFleetManager: Open source software for bike loan management
cortex_binary_reader: Command line tool for reading binary files produced by the Cortex de novo assembler and variant caller
cours-sur-git: null
coveo-blitz-2013: null
csativa: csativa
debby: A demo implementation of Succinct de Bruijn Graphs.
debian-med-ray: null
deepdream: null
deploy_dev: Tools for deploying a KBase development environment in docker containers
dot-files: null
double-entry-accounting: null
EASTL: EASTL stands for Electronic Arts Standard Template Library. It is an extensive and robust implementation that has an emphasis on high performance.
edamame-course-website: website for EDAMAME course at Kellogg Biological Station, Michigan State University, MI, USA
erlang-tests: null
FastDemultiplexer: A sequence demultiplexer for the Illumina HiSeq technology
force-graph: This is a force-directed graph viewer.
git: Git Source Code Mirror - This is a publish-only repository and all pull requests are ignored. Please follow Documentation/SubmittingPatches procedure for any of your improvements.
GitHubBackup: null
HiSeq2500-NA12878: null
hiv-dskernel: null
ift615-tp3-2007: null
inicrond: inicrond is a education-oriented content management system. It is written in php and supports MySQL. Go on the freshmeat site for more details.Inicrond : Network of Interactive Courses Registred On a Net Domain
interfaces-and-implementations: null
kbrouter: Flask-based RPC router that can start Docker containers on demand
kiki: De novo metagenomic assembly
knowledge-base: RunAbove knowledge base website
latency_checker: null
libvirt-scripts: null
LinuQ-MPI-2013: null
localnotes: Simple web interface to write/edit short notes in localStorage.
lttng-analyses: Analyses scripts for LTTng kernel traces (official repository)
lttng-docs: The LTTng Documentation source
lttng-tools: This repo is a mirror of the official lttng-tools git found at git://git.lttng.org/lttng-tools.git. The lttng-tools project provides a session daemon (lttng-sessiond) that acts as a tracing registry, the "lttng" command line for tracing control, a lttng-ctl library for tracing control and a lttng-relayd for network streaming.
lttng-ust: This repo is a mirror of the official lttng-ust git found at git://git.lttng.org/lttng-ust.git. LTTng-UST, the Linux Trace Toolkit Next Generation Userspace Tracer, is port of the low-overhead tracing capabilities of the LTTng kernel tracer to user-space. The library "liblttng-ust" enables tracing of applications and libraries.
lttng-ust-tracepoint_dlopen_ptr: null
lustre-benchmarks: null
lustre-bugs: null
megahit: MEGAHIT: An ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph
MessageWarden: MessageWarden - an acceptation test for supercomputers
MHAP: MinHash Alignment Process (MHAP, pronounced MAP): locality-sensitive hashing to detect long-read overlaps and utilities
MidiVideoConference: Midi Vid�o-Conf�rences de bio-informatique
mini-ranks: null
minitest: minitest provides a complete suite of testing facilities supporting TDD, BDD, mocking, and benchmarking.
minix: null
mlbench: show me your IID
module-sandbox: null
MPI-fairness: MPI-fairness
NGS-Pipelines: null
NIH_Human_Microbiome_Project: NIH_Human_Microbiome_Project
open-assembler: Prototype for genome assembly
opencode.ca: null
open-gov-hack-night: Website for Chicago's weekly open gov hack night
paired-read-simulator: A paired read simulator for next-gen sequencing
Paper-Replication-2012: null
patches: null
photon-assembler: photon-assembler
pluralsight-angularjs-course: null
random-scripts: null
RawSequencesQC: null
ray: Ray -- Parallel genome assemblies for parallel DNA sequencing
Ray-Cloud-Browser: null
Ray-fedora: null
Ray-in-Amazon-EC2-CLOUD: null
Ray-in-DNANexus: null
RayKmerSearchDevel: null
ray-logo: ray-logo
Ray-on-ArchLinux: null
Ray-on-Cray: null
Ray-on-IBM-Blue-Gene-Q: null
ray-packaging-for-Fedora: null
RayPlatform: RayPlatform is a message-passing-interface programming framework.
RayPlatform-example: null
Ray-Releases: Stable releases of Ray (mirror of what is at http://sourceforge.net/projects/denovoassembler/files/)
ray-scaffolding-tools: Tools for genome scaffolding algorithm development
Ray-TestSuite: null
Ray.web: null
RepeatExplorer: null
Rheumatoid_Arthritis_Responder_Challenge: null
routing-sandbox: null
rTANDEM: null
ruby_chess: Ruby Chess is a chess game implemented in Ruby using GTK2. It has a good artificial intelligence that is heuristic-based and stochastic.
scheduling-sandbox: scheduling-sandbox
scheme-asteroid: scheme-asteroid is a real-time asteroid-like game. It has a neat object-oriented architecture, includes a real-time physics engine, and utilizes a triple-buffering display system. All graphics and artwork (e.g. background images) are generated on-the-fly using fractals and recursive procedures.
scheme-exemples: null
science-outreach: null
seafile: Seafile -- Self-hosting dropbox for teams
seb-ledger: null
self: null
Shock: null
slim-volleyball-js: slim-volleyball-js
SoilAbundance: An Example of the SoilAbundance MapReduce loader and MapReduce scanner for Accumulo
soil-metagenome-samples: null
SRA056234-Picea-glauca: null
test-accents: null
Tetravex-solver: Tetravex solver
userspace-rcu: This repo is a mirror of the official userspace-rcu git found at git://git.lttng.org/userspace-rcu.git. liburcu is a LGPLv2.1 userspace RCU (read-copy-update) library. This data synchronization library provides read-side access which scales linearly with the number of cores.
velvet: Short read de novo assembler using de Bruijn graphs
vimrc: my vimrc
vim-simple-complete: null
vtable-tests: vtable-tests
water: Projects for the water team
workspace_browser: workspace-browser

Commits To

Repository	Most Recent Commit	# Commits

This work is supported by the National Institutes of Health's National Center for Advancing Translational Sciences, Grant Number U24TR002306. This work is solely the responsibility of the creators and does not necessarily represent the official views of the National Institutes of Health.