Jake Vanderplas

Login: jakevdp

Company: University of Washington

Location: Seattle WA

Bio: Data Scientist at @uwescience

Blog: http://www.vanderplas.com

Blog: http://www.vanderplas.com

Member of

1. scikit-learn
2. SciPy
3. UW eScience Institute
4. null
5. null
6. null

Repositories

2013_fall_ASTR599

Content for my Astronomy 599 Course: Intro to scientific computing in Python

2014_fall_ASTR599

Content for my Astronomy 599 / Applied Math 500 Course: Intro to scientific computing in Python

administrative

Project management related documents for the scikit-learn

altair

High-level declarative visualization library for Python

altair2

Just playing around... nothing to see here

altair-block

A tool to streamline creation of Altair plots for https://bl.ocks.org/

altair-examples

Some examples of Altair plots

altair-feedstock

A conda-smithy repository for altair.

anaconda-ec2

Anaconda plugin for StarCluster

ASTR599_homework

Repository for students to submit homework assignments as pull requests

AstroAuthorQuery

A simple chrome extension to do quick ADS author queries from the Chrome Omnibox

astropy

Repository for the Astropy core package

astropy-binder

Simple binder for astropy

astropy-v2.0-paper

Repository for the second Astropy paper

BayesianAstronomy

Bayesian Methods in Astronomy workshop, presented at AAS227

BinaryTree

A cython implementation of a binary search tree (Ball Tree & KD Tree)

bokeh

Interactive Web Plotting for Python

BombScargle

Test implementation of a robust multi-term Lomb-Scargle variant

conda-recipes

Some conda build recipes

corner.py

Make some beautiful corner plots.

Creative-Commons-Markdown

Markdown-formatted Creative Commons licenses

cython

A Python to C compiler

cython_template

Package template for a project using Cython

d3

A JavaScript visualization library for HTML and SVG.

dashboardjs

Dashboard backend using node.js, expressjs and backbone

data-CDCbirths

Historical US birth data culled from the CDC website

data-USstates

Collection of CSV data on US states for Pandas merge demos

demo_repo

Demonstration repo from 2017-06 Git tutorial

docathon

Docathon organization

DSFP-demo

Demo repository for DSFP

ECML_PKDD_2013

Paper by scikit-learn contributers for ECML/PKDD 2013 conference

ESAC-stats-2014

Material for my lectures at the ESAC statistics conference, Oct 27-31 2014

FastTemplatePeriodogram

NlogN algorithm for least-squares fitting of periodic templates to noisy, non-equispaced time-series data.

FastTemplatePeriodogram_old

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flann-feedstock

A conda-smithy repository for flann.

FreqBayes

[obsolete] Temporary repository for Frequentism vs Bayesianism writeup

GeneratedNotebookExample

An example of a programatically-generated IPython notebook

george

Fast and flexible Gaussian Process regression in Python

gh-publisher

A small package of software which will help you configure an automated build and publish process, using Travis CI and GitHub Pages.

git-intro

Git/Github Intro

GitIntro

Git tutorial materials

git-test

Testing repo for git tutorial

hist-review

A Review of Histogram techniques

html-css-resume-template

A resume template based on HTML5 and CSS

hyde

A Python Static Website Generator

IJulia.jl

Julia kernel and magics for IPython

ipython

Official repository for IPython itself. Other repos in the IPython organization contain things like the website, documentation builds, etc.

ipython-vega

iPython/Jupyter notebook module for Vega, and Vega-Lite, Polestar, and Voyager

ipywidgets-static

[obsolete] Static Widgets for IPython Notebooks

jakevdp.github.com

Octopress Blog (replaced by jakevdp.github.io)

jakevdp.github.io

Pythonic Perambulations website. Source at http://github.com/jakevdp/jakevdp.github.io-source

jakevdp.github.io-source

Source for my Pythonic Perambulations blog

jakevdp-git-test

Test repo for a tutorial

JSAnimation

[DEPRECATED] An IPython notebook-compatible Javascript/HTML viewer for matplotlib animations

julia

The Julia Language: a fresh approach to technical computing.

jumpy

Place Holder

jupyter-demo

Jupyter demo at microsoft

JupyterWorkflow

Reproducible Data Analysis Workflow in Jupyter

JupyterWorkflow-source

Materials for my Jupyter Workflow videos

kdsphere

KD Trees for Sperical Data

klsh

Python implementation of Kernelized Locality Sensitive Hashing

letter

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llvmpy

My fork of the llvm-py svn repository

lombscargle

Efficient, astropy-compatible implementation of the Lomb-Scargle periodogram

lpproj

Scikit-learn compatible Locality Preserving Projections in Python

LRG_redshifts

Finding double redshifts in SDSS LRGs

LSST-DSFP-Resources

For computing/programming/statistical resources compiled by LSSTC Data Science Fellows

MagicCube

don't ask

marathon-data

Marathon finishing times

matplotlib

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matplotlib_pydata2013

PyData SV 2013 Tutorial on Advanced Matplotlib

megaman

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megaman-feedstock

A conda-smithy repository for megaman.

memview_benchmarks

Benchmarks of various ways of handling contiguous typed data arrays in cython

mpl_tutorial

A basic Matplotlib tutorial

mst_clustering

Scikit-learn style estimator for Minimum Spanning Tree Clustering in Python

multiband_LS

Source for our paper on multiband periodograms.

myproject

Git tutorial project

nbconvert

IPython notebook converter

nbviewer

Nbconvert as a webservice (rendering ipynb to static HTML)

networkx

Official NetworkX source code repository.

nfft

Lightweight non-uniform Fast Fourier Transform in Python

nfftls

Astropy-style Lomb-Scargle periodograms computed with the NFFT

NIPS2013_sklearn

Abstract for NIPS 2013

nufftpy

Experimenting with pure-Python implementation of the NUFFT

numpy

Numpy main repository

nyquist

The Nyquist frequency is probably not what you think it is.

obsdwarf

Measuring modified gravity with Dwarf galaxies

openrecipes

An open database of recipe bookmarks

OpenVisConf2014

My Talk for the 2014 OpenVisConf, April 24-25 in Boston, MA

OsloWorkshop2014

Material for my lectures at the University of Oslo, Dec 2014

pandas

Flexible and powerful data analysis / manipulation library for Python, providing labeled data structures similar to R data.frame objects, statistical functions, and much more

paper-on-cluster-lensing

Software paper in progress, documenting the cluster-lensing package

pdvega

Pandas plotting to vega/vega-lite

pelican

Static site generator that supports Markdown and reST syntax. Powered by Python.

pelican-ipythonnb

Pelican plugin for blogging with iPython Notebooks

pelican-octopress-theme

Octopress default theme copied for pelican

pelican_plugin-latex

A plugin for the pelican blog to allow it render mathematics in Latex.

pelican-plugins

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periodogram

Unified implementation for period-finding in astronomical time series

PMLC-2014

Lecture materials for Microsoft Practice of Machine Learning Conference, Oct 23-24 2014

popylar

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PracticalLombScargle

Source for my paper, Understanding the Lomb-Scargle Periodogram

ProbabilisticLensing

An attempt to formulate the weak lensing problem in a probabilistic framework.

ProntoData

Scripts to Analyze Pronto's Data Release

pyamg-feedstock

A conda-smithy repository for pyamg.

PyCall.jl

Package to call Python functions from the Julia language

pyCRFsuite

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PyData2014

Materials for my talks at PyData 2014 at Strata, NYC

pyDistances

Work in progress for eventual contribution to scikit-learn

pyjulia

python interface to julia

pyLLE

python wrapper of fast C++ LLE code

pyOrbits

python orbit integration

pypropack

A python wrapper for the PROPACK library

pySchrodinger

A Python solver for the 1D Schrodinger equation

PythonDataScienceHandbook

Python Data Science Handbook: full text in Jupyter Notebooks

PythonDataScienceReview

Work-in-progress review for WIREs

PythonicPerambulations

Old source for jakevdp.github.io. New source at http://github.com/jakevdp/jakevdp.github.io-source

PythonLectures

Various One-off Lectures on Python

Python-Markdown

A Python implementation of John Gruber?s Markdown.

python-tutorial

Files for my Python tutorials

python-vis-landscape

Code for my talk at PyCon 2017

pyTree

python tree algorithms for nearest neighbor search

regper

Experiment with regularized periodograms

RSE4DataScience18

Repo containing docs and outputs from the RSE4DataScience18 meeting.

schemapi

Auto-generate Python APIs from JSON schema specifications

schema-validation

Experiments with validating JSONSchema in Python

SciAmBlogPost

Source materials for my Scientific American blog post

scikit-learn

scikit-learn: machine learning in Python

scipy

Scipy main repository

scipy2013_talks

Content presented at the 2013 SciPy conference

scipy2014

Website for 2014

SciPy-2014

Symposion-based website for US 2014 conference

scipy-conference

SciPy Conference Materials

scipy_proceedings

Tools used to generate the SciPy conference proceedings

seaborn

Statistical data visualization using matplotlib

SeattleBike

Understanding Seattle Bike Count data

sga

de novo sequence assembler using string graphs

shablona

A template for small scientific python projects

ShareJS

Collaborative editing in any app

shim

Very simple HTTP service for SciDB

siglearn

Tools for machine learning & modeling with noisy data

sklearn_pycon2013

Files for my scikit-learn tutorial at PyCon 2013

sklearn_pycon2014

Repository containing files for my PyCon 2014 scikit-learn tutorial.

sklearn_pycon2015

Materials for my Pycon 2015 scikit-learn tutorial.

sklearn_pydata2015

Scikit-Learn Tutorial for PyData Seattle 2015

sklearn_scipy2013

Scikit-learn tutorials for the Scipy 2013 conference

sklearn_tutorial

Materials for my scikit-learn tutorial

sncosmo

Python library for supernova cosmology

SNEPlots

Cosmology plots and animations based on simulated LSST Supernovae

soma

Repository for Graduate Seminar: Statistics, Observation, and Modeling in Astronomy

sparse

null

spec_data

Cleaning SDSS spectra for use with Mmani

spheredb

Python utilities for storage and manipulation of spherical data in SciDB.

staged-recipes

A place to submit conda recipes before they become fully fledged conda-forge feedstocks

statsmodels

Statsmodels: statistical modeling and econometrics in Python

Stripe82RRLyrae

Searching LSST-pipeline Stripe 82 photometry for RR Lyrae

supersmoother

Efficient pure Python implementation of Friedman's Supersmoother

supsmu

Wrapper of Friedmann's 1984 Supersmoother Fortran code

talks

Slides, notebooks, and other info from my talks

test

Testing repository from the Python Bootcamp

test_2

test repository for git tutorial

test-cairo

Small repo to test nodejs + cairo on TravisCI

test_ghpages_subdirectory

Temporary: testing a subdirectory on github pages

TestRepository

Repository for demonstrating pull requests

Thesis

Jake's PhD thesis, completed summer 2012

traitlets

A lightweight Traits like module

travis-python-template

Small template for setting up Travis CI with Python

uw-6.github.io

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UW_Python_for_Geosciences

Talks from the UW Python for Geosciences Seminar

vega-datasets

Common repository for example datasets used by Vega-related projects

vega_datasets-feedstock

A conda-smithy repository for vega_datasets.

vega-feedstock

A conda-smithy repository for vega.

vega-lite

A grammar of interactive graphics, built on Vega.

vgparser

(experimental) Python parser for Vega's expression language

website

My Personal Web Page: http://vanderplas.com

WhirlwindTourOfPython

The Jupyter Notebooks behind my OReilly report, "A Whirlwind Tour of Python"

wpca

Weighted Principal Component Analysis (PCA) in Python

Commits To