B. Arman Aksoy

Login: armish

Company: http://ergoso.me

Location: New York, NY

Bio: null

Blog: http://arman.aksoy.org

Blog: http://arman.aksoy.org

Member of

1. Hammer Lab

Repositories

3Dmol.js

WebGL accelerated JavaScript molecular graphics library

awesome

:sunglasses: Curated list of awesome lists

awesome-computer-history

An Awesome List of computer history videos, documentaries and related folklore

bioconda-recipes

Conda recipes for the bioconda channel.

biopax2bel

BioPAX to BEL converter

bitbar

Put the output from any script or program in your Mac OS X Menu Bar

cbio-coffee

A web-service to help cBioers track their coffee drinking habits and donations towards our next shiny coffee machine

cbioportal

null

cloml

An OCaml tool to annotate VCF files with clonality information

cmdliner

Declarative definition of command line interfaces for OCaml

coffeewheel

D3 Coffee Wheel visualization ported to R via htmlwidgets framework

cohorts

Utilities for analyzing mutations and neoepitopes in patient cohorts

commentary-article

Commentary article for gigascience

drexplorer

A versatile tool to analyze dose-response data for anti-cancer drug screening using R

enzymeportal

The EBI Enzyme Portal

ergosome

Ergoso.me

evaluate-biomarkers

Various methods for evaluation of biomarkers for clinical efficacy

evsrc

evSrc: EVolutionary SouRCe

flippant.js

A mini dependancy-less UI lib for flipping over DOM nodes.

gen_js_api

Easy OCaml bindings for Javascript libraries

git-helpers

A few helpers for augmenting and prettifying existing git functionality.

gundo.vim

A git mirror of gundo.vim

hesaplamali-biyoloji-sozluk

Hesaplamal? Biyoloji dal?nda s?k kullan?lan ?ngilizce terimlerin Türkçe kar??l?klar?

homebrew-science

:microscope: Scientific formulae for the Homebrew package manager

htmlwidgets

HTML Widgets for R

htmlwidgetsgallery

null

indubitably

Simple, functional JSON schema validator that leaves no room for doubt

janestreet.github.com

Front page

js_of_ocaml

Compiler from OCaml to Javascript.

keras

Deep Learning library for Python. Runs on TensorFlow, Theano, or CNTK.

latex-to-html5

Scripts for Latex to HTML5 conversion

Mash

Fast genome and metagenome distance estimation using MinHash

maui-indexer

Automatically exported from code.google.com/p/maui-indexer

metabologram

A customized CoffeeWheel visualization

ocaml.org

Implementation of the ocaml.org website.

phylowgs

Application for inferring subclonal composition and evolution from whole-genome sequencing data.

pileup

null

pileup.electron

pileup.js wrapped with Electron as a desktop application

pytcga

Store and query public TCGA data

PyVCF

A Variant Call Format reader for Python.

replicate-10.1016-j.cell.2016.02.065

Replicate and evaluate the results reported in http://dx.doi.org/10.1016/j.cell.2016.02.065

research-proposal

Research proposal for applying to independent postdoc positions

saturn-colors

Saturn terminal theme

sciclone

An R package for inferring the subclonal architecture of tumors

scientific-spammers

A shared blacklist of e-mail addresses that spams scientists via exploiting the corespondance address of an article

secotrec

Setup Coclobas/Ketrew Clusters

Spectacle

Spectral learning for Annotating Chromatin Labels and Epigenomes

support

a place for all ZenHub customers

TCGAbiolinksGUI

TCGAbiolinksGUI code development for R/Bioconductor submission https://tcgabiolinksgui.shinyapps.io/TCGAbiolinksGUI/

travis-docker-experiments

null

tryocaml

An interactive tutorial to begin learning with OCaml

up

Deploy infinitely scalable serverless apps, apis, and sites in seconds.

Commits To