CD2H gitForager

Chris Maloney

Login: Klortho

Company: null

Location: null

Bio: null

Blog: http://sinophibe.blogspot.com/

Member of

Repositories

2012-naward12: null
API-All-the-X: Resources and Materials for the /Developer Program
appjs: (Deprecated!) SDK on top of nodejs to build desktop apps using HTML5/CSS/JS
biocode: Bioinformatics script collection
bioinformatics: Tools for bioinformatics
BioMarkupWorkshop: Slides for talk
biostor-jats: BioStor articles marked up using Journal Archiving Tag Set
bit2factor.org: Two-factor Bitcoin (BIP38)
canvas-looper: experiment with fabric.js
cfpb.github.io: A site for the CFPB to share and discuss its technology work with the world.
chain-tree-map: null
citation-exporter: Demo app for trying out citeproc-java
citeproc-java: A Citation Style Language (CSL) processor for Java.
citeproc-node: node.js server and slight modifications to citeproc-js to run in node
Comment_BadruddinAslam2014: A repo hosting the data code and figure outputs for a comment on the work of Badruddin & Aslam (2014). An analysis of extremes in the Indian Monsoon in relation to solar activity.
config-one: One config library to rule them all
config-one-project: metadata/notes on my work on config-one and related repos
cookiecutter: A command-line utility that creates projects from cookiecutters (project templates). E.g. Python package projects, jQuery plugin projects.
cookieman: All my jQuery Plugins in one handy place.
crypton: :lock: A framework for creating zero-knowledge mobile & desktop applications
crypton-web: null
css-wide-keywords: An array of the CSS-wide keywords
cz-cli: The commitizen command line utility.
d3: A JavaScript visualization library for HTML and SVG.
d3-flextree: A new, flexible, backward-compatible tree layout algorithm for D3
d3test: null
datadicer-tutorials: null
devdocs: API Documentation Browser
devdocs_example: Example of how to do devdocs.io scraper
diffxml: Diff and Patch XML files
dillinger: The last Markdown editor, ever.
display-flipper: null
django-tutorial: Django Tutorial Project
dotfiles: .bashrc, .vimrc, etc.
DtdAnalyzer: null
dtd-diagram: Interactive, dynamic display of DTD schema
edirect: null
elink-json: null
Encryptr: Encryptr is a zero-knowledge cloud-based password manager / e-wallet powered by Crypton
ensembl-rdf: null
Eutils-JSON: Conversion XSLTs for NCBI Eutilities XML to JSON
eutils-org: Project to produce RDF output for some NCBI E-utilities
evidence-and-truth: null
example-api: GitBook API example
explain-git-with-d3: Use D3 to visualize simple git branching operations.
fake: for testing
flextree-java: Code accompanying the SP&E paper "Drawing non-layered tidy trees in linear time" by Atze van der Ploeg
fortunes: null
fsevents-tools: Like inotify-tools but for OS X's FSEvents
genbank-book: null
gene-protein-tool: null
get-github-usernames: Some fancy footwork to get github usernames from email addresses
gitbook: ? Modern documentation format and toolchain using Git and Markdown
gitbook-msaviewer: null
git-http-server2: serve a directory of git repositories over http
github-demos: A sandbox for opensource demonstrations of GitHub
gitit: A wiki using HAppS, pandoc, and git
gitit-openshift: Openshift "Do-It-Yourself" app
grails-tutorial: Working through Grails 2 The Definitive Guide
grunt-config-config: Simple, non-opinionated, lightweight tool for adding profiles and user overrides to Gruntfiles
grunt-release: Release a new version of your Node-based project
grunt-template-functions: Use real JavaScript functions instead of string-based template in your Grunt config
grunt-wiredep: Inject Bower packages into your source code with Grunt.
gulp-gh-pages: gulp plugin to publish contents to Github pages
gulp-starter: My step-by-step walk through the vigetlabs/gulp-starter features
guns-data: null
HackpadScript: Greasemonkey script to add a few UI controls to Hackpad
HashingLab: null
HistoneDB: Browse all histone sequences by histone varaints
hmm: Hidden Markov models in Python
icn3d: Client-side structure viewer
identifiers: null
ideogram: Chromosome visualization with D3.js.
InconsistentXml: null
jatsdoc: Refactored JATS Tag Set Documentation Framework
JATS_Literatum_transpect: transpect front-end for oXygenJATSframework_Literatum
jatspan: JATSPAN - The JATSPack Archive Network
JATSPreviewStylesheets: JATS Preview Stylesheets
jats-supmat: JATS extension to to include the NISO/NFAIS Recommended Practices for Online Supplemental Journal Article Materials
JatsTagLibrary: Improvements to the JATS Tag Library documentation
JavaHamcrest: Java (and original) version of Hamcrest
javascript-play: Playing around with JavaScript
java-xml-tools: Quickly and easily set up some open source XML tools
jekyll-docs-template: Jekyll template for documentation-based sites
jekyll-tutorial: null
jhu-wikipedia: Script for organizing JHU Wikipedia project
jquerytools: The missing UI library for the Web
jsan: null
jsdelivr: A free Open Source CDN for webmasters and developers
jsdom: A JavaScript implementation of the WHATWG DOM and HTML standards, for use with node.js
jsonix: Powerful XML<->JSON JavaScript mapping library.
json-lite: Fast non-blocking JSON viewer for Chrome and Firefox
jsonview: A Firefox extension that helps you view JSON documents in the browser.
kitty-cache: Automatically exported from code.google.com/p/kitty-cache
labibi: null
libxmljs: libxml bindings for v8 javascript engine
line-reader: null
locales: Official repository for Citation Style Language (CSL) locale files.
logic-game: JavaScript tutorial, in which we build an interactive game
lxml: The lxml XML toolkit for Python
mailman: An incoming mail processing microframework in Ruby
markdown-mayhem: A sample file for comparing differences between bitbucket and github markdown rendering
markdown-preview: Markdown Preview Plus -- Enables Chrome to render markdown files as HTML
markdown-toc: Generate a TOC (table of contents) for markdown files, using remarkable. Used by assemble, verb, and lots of other projects.
MathJax: Beautiful math in all browsers
MathJax-dev: Build and release tools for the MathJax project
mathjax-docs: MathJax documentation. Beautiful math in all browsers. Beautifully documented.
MathJax-node: Mathjax for Node
mathjax-tests: Tests and sample files for trying stuff out with MathJax
maze-generators: null
mediawiki-services-mathoid: Github mirror of "mediawiki/services/mathoid" - our actual code is hosted with Gerrit (please see https://www.mediawiki.org/wiki/Developer_access for contributing
MedicineEvidenceBot: Mediawiki bot to populate Wikipedia medicine article talk pages
mocha-xml-validator: Shrink-wrapped test tool for XML/DTD packages.
ncbi-dillinger: test
ncbi-formats: null
ncbi.github.io: Welcome to the NCBI GitHub portal on GitHub pages.
ncbi-public-repos: Static page for displaying list of NCBI public repositories
ncbi-static-template: trying out gitbook
niso-ali: Examples of NISO ALI metadata and copies of the schema
node-config: Node.js Application Configuration
node-curried-paths: Let's you create functions for paths that behave like path.join()
node-d3-flextree-demo: Simple demo of a Node.js script using d3-flextree to generate SVG outside the browser
node-java-maven: Utility for Node's java module to load mvn dependencies.
nvm: Node Version Manager - Simple bash script to manage multiple active node.js versions
one-bottle-of-pop: null
one-time-note: null
open-access-media-importer: An automated tool for importing media files in Open Access articles into Wikimedia Commons
open-source-program: This is a set of artifacts that an organization can use to help bootstrap and support an open source program.
osiris: OSIRIS is a public domain quality assurance software package that facilitates the assessment of multiplex short tandem repeat (STR) DNA profiles based on laboratory-specific protocols. OSIRIS evaluates the raw electrophoresis data contained in .fsa or .hid files using an independently derived mathematically-based sizing algorithm. OSIRIS currently supports ABI capillary analytical platforms and numerous commercially available marker kits including all CODIS-compliant kits as well as those favored by biomedical laboratories.
oXygenJATSframework: oXygen XML Editor framework for NISO JATS 1.0 / NLM BITS
PageTurner: Android e-book reader with cloud synchronization
phantomjs: Scriptable Headless WebKit
ph-schematron: Java Schematron library that supports XSLT and native application
Physics-Unit: Perl Physics::Unit module
pixie: Unofficial rewrite of Scratch in JavaScript.
PMCXMLConverters: PMC XML Converters
project-open-data.github.io: Open Data Policy ? Managing Information as an Asset
pub-one: NCBI unified document metadata format
pytest-gitignore: py.test plugin to ignore the same files as git
python-eutils: Django project accessing PubMed backends
quine-relay: An uroboros program with 50 programming languages
ramda: :ram: Practical functional Javascript
ramda.github.io: :ram: :globe_with_meridians: Documentation for Ramda.js
rdf-uri-resolver: RDF URI Resolver
RegHex: Do you like regular expressions, hexagons, and crosswords? Then try RegHex!
rendermath3: Node server listens for MathJax post, returns rendered math.
rollup: Next-generation ES6 module bundler
rollupjs.org: Rollup demo website
safe-http-server: a simple zero-configuration command-line http server
sample-django-project: Sample project to discover different options for static files management
sample-webpack-project: null
sandbox: Just for trying out and learning git and github.
schema: Citation Style Language schema
securedrop: GitHub repository for the SecureDrop whistleblower platform. Do not submit tips here!
settings-overrider: Override Python dict contents with YAML file and/or environment variables
settings-resolver: Allows interdependent Django settings overrides, through late binding
singular-dc: Multi-Dimensional charting built to work natively with crossfilter rendered with d3.js
snap: a visual programming language inspired by Scratch
snap-blocks: Collections of snap blocks for various purposes
spring_play: null
sratoolkit: SRAToolkit
sra-tools: SRA Tools
stuff: Cool stuff
styles: Official repository for Citation Style Language (CSL) citation styles.
svg_examples: For playing around with SVG
TagLibPermalink: Browser user script to add a permalink to the JATS tag library pages
teamcity-resources: null
test: null
test-encodings: null
test-saxon-catalogs: Test out Saxon's problem with OASIS catalogs
testsite: test test test
theme-api: Theme for publishing a beautiful API documentation with GitBook
theme-default: Default theme for GitBook
theme-ncbi: null
theme-official: GitBook theme for our own books
TouchSwipe-Jquery-Plugin: TouchSwipe is a jquery plugin to be used with jQuery on touch input devices such as iPad, iPhone etc.
tree-chart: Simple animated tree diagrams
treesaver: JavaScript library for creating column and page-based layouts
try-classeur: null
try-gitbook: null
try-node-java-saxon: Cool! You can run Java applications from inside Node.js
tt: null
valentine-epicycloids: Animated Valentine; inspired by https://johncarlosbaez.wordpress.com/2013/12/03/rolling-hypocycloids/.
w3c-schema-dtd: W3C DTD for XML Schema, as an npm package
weather: Sample Spring MVC app for displaying the weather
weather-app: Shishir's weather app
webpack-experiments: null
webstorm-settings: null
wikipedia_course: Ruby on Rails application to help keep track of students/articles/groups
wumzom: Stuff for Zombo's Amusement
znap: null
zvg: Zombo Vector Graphics

Commits To

Repository	Most Recent Commit	# Commits
Klortho/d3-flextree	2016-05-31 07:55:12.0	89

This work is supported by the National Institutes of Health's National Center for Advancing Translational Sciences, Grant Number U24TR002306. This work is solely the responsibility of the creators and does not necessarily represent the official views of the National Institutes of Health.