Marcel Martin

Login: marcelm

Company: null

Location: Stockholm

Bio: null

Blog:

Blog:

Member of

  1. Science For Life Laboratory

Repositories

bioconda-recipes
Conda recipes for the bioconda channel.
blobtools
Application for the visualisation of draft genome assemblies and general QC
bzip2-feedstock
A conda-smithy repository for bzip2.
CAW
Cancer Analysis Workflow prototype
CAW-containers
Containers for CAW
cutadapt
cutadapt removes adapter sequences from sequencing reads
cyvcf2
cython + htslib == fast VCF and BCF processing
IGV
Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations
maildir-deduplicate
Deduplicate mails from a set of maildir folders.
matplotlib-feedstock
A conda-smithy repository for matplotlib.
migrate-test
null
MultiQC
Aggregate results from bioinformatics analyses across many samples into a single report.
nextflow
A DSL for data-driven computational pipelines
palm_pipeline
null
picard
A set of tools (in Java) for working with next generation sequencing data in the BAM (http://samtools.sourceforge.net) format.
pyfaidx
Efficient pythonic random access to fasta subsequences
PyLOH
Deconvolving tumor purity and ploidy by integrating copy number alterations and loss of heterozygosity
pysam
Pysam is a python module for reading and manipulating Samfiles. It's a lightweight wrapper of the samtools C-API. Pysam also includes an interface for tabix.
PyVCF
A Variant Call Format reader for Python.
radonwave
Read radon levels from Airthings Wave
r-knitr-feedstock
A conda-smithy repository for r-knitr.
singularity
Singularity: Application containers for Linux
staged-recipes
A place to submit conda recipes before they become fully fledged conda-forge feedstocks
wgs-structvar
Whole Genome Sequenceing Structural Variation Pipelines
xopen
Open any compressed file in Python

Commits To

RepositoryMost Recent Commit# Commits
marcelm/cutadapt2018-03-18 18:29:43.01036
ISA-tools/bioconda-recipes2017-11-23 14:06:31.01

This work is supported by the National Institutes of Health's National Center for Advancing Translational Sciences, Grant Number U24TR002306. This work is solely the responsibility of the creators and does not necessarily represent the official views of the National Institutes of Health.