Christian Diener

Login: cdiener

Company: null

Location: Mexico

Bio: null

Blog: http://cdiener.com

Blog: http://cdiener.com

Member of

1. openCOBRA
2. PythonDay Mexico
3. Resendis Antonio Lab

Repositories

bar1_project

Source code for the publication of Diener, Schreiber, Giese et. al. (2014)

cddlib

Github fork of Komei Fukuda's cddlib

cobra-docker

Dockerfile to build a single user jupter notebook server running cobrapy and additional tools for flux-based modeling.

cobrapy

COBRApy is a package for constraint-based modeling of biological networks

cobrapy_website

Mockup for the new cobrapy website

cobra_whats_new

Simple notebook showcasing the new COBRApy features.

dcf

Peptide design by compatible functions.

dotfiles

Configs for Linux.

dycone

Analyze enzyme regulation with metabolome data.

gcan

Small script to analyze biological growth curve data.

gopractice

Several small Golang practice programs. Mostly inspired by CS50.

govitae

Render JSON résumés with Go.

guacamole

Our Guacamole recipe

hadoop-teaching

Simple docker image giving a functional hadoop single node cluster for teaching purposes.

hugo-page

A personal web site built with HUGO.

kcone-paper

Materials and protocols for the publication of Diener et. al.

micom

Python package to study microbial communities using metabolic modeling.

nxviz

Visualization Package for NetworkX

odevo

A fast and parallel ordinary differential equation optimizer with compiled systems and easy scripting interfaces.

OpenCL-Wrapper

An OpenCL C++ wrapper to facilitate OpenCL implementation

optlang

optlang - sympy based mathematical programming language

pokemon_app

Esqueleto para un simple servicio que predice que Pokemon gana en una pelea.

proliferation

Project to study proliferation and metabolic liabilities across several thousand cancer samples.

pyart

Some small python programs to generate "artistic" versions of images.

pytest_tutorial

A small example project for my PyTest tutorial.

qiime-docker

Docker image for our Qiime pipeline

soma

A small opiniated CSS framework using material design principles and some twists.

soplex_cython

Cython bindings to soplex 3.0

sweet-home

Proyecto del hackathon #ComoNiña

swiglpk

Simple swig bindings for the GNU Linear Programming Kit

tcgar

R package to read TCGA data and connect it to analysis pipelines (e.g. bioconductor).

xtraining

Materials for the X-training 2016

Commits To