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Tiffany Timbers

Login: ttimbers

Company: Simon Fraser University

Location: Burnaby, BC, Canada

Bio: #datascientist #teacher #genomicist #behaviouralneuroscientist #jackofalltrades #masterofafew

Blog: http://tiffanytimbers.com

Repositories

2015-03-30_SFU: null
2015-04-30-SFU: null
2015-07-24-LSIUBC: null
2015-10-05-UC: Software Carpentry Workshop
2015-10-17-SFU: null
2015-12-10_UBC_CS: Application for Tenure Track Teaching Position in Dept. Computer Science at UBC
2016-02-02-SFU: null
2016-03-15_UBC_Data_Science: Application for Postdoctoral Teaching & Learning Fellow, associated with a proposed Master of Data Science (MDS) program at the University of British Columbia (UBC)
angus: Materials for Analyzing Next-Generation Sequencing (ANGUS) course.
ASDA_stats_models_workshop_day1: null
assignment_1: Organizing & setting up a project directory
bc: Template for Software Carpentry bootcamp site repository.
behaviotypes: null
board: Holds public material generated by and for the SCF board.
CaMK_and_OGT-1_modulate_mechanoresponding_and_learning: Manuscript titled "CaMK (CMK-1) and O-GlcNAc transferase (OGT-1) modulate mechanosensory responding and learning in C. elegans"
co2_turn_freq: Analysis of turn frequency during a CO2 MWT experiment
computational-project-cookie-cutter: A cookie cutter to set up a folder structure for a computational project
conda_example: null
convertemp: R package to convert temperatures between Celsius, Kelvin, and Fahrenheit
data_analysis_pipeline_eg: null
dibsi: Data Intensive Biology Summer Institute
dib-training: Web site for Data Intensive Training at UC Davis
distransam: R package to create random samples with equal N's across different sample groups
Docker_files: Docker files that I use for various projects
eg_hwk: Example homework repository for github as a course delivery talk
equine_numbers_value_canada: Shiny app that shows historical population of horses in Canada between 1914 and 1972
examples: Examples of exercises that accompany Effective Computation in Physics
ezknitr: Avoid the typical working directory pain when using 'knitr'
final_project: null
Final_Project-1: A repository for my final project
Final-Project-1: null
Final_Project2: Final Project folder for upload
Final_Project-2: null
Final_Project-3: Change in pipe organ pitch from CO2 concentration
Final_Project_on_Marketing: null
final_project_proposal: null
Final_Project_Weather_Nicholas_Allan: null
foofactors: What the Package Does (one line, title case)
Fraser_River_Water_Quality: This repository is used to store the folder for Computation in Physical Sciences final project
gapminder: Excerpt from the Gapminder data, as an R data package and in plain text delimited form
github_course_delivery_system: Talk on how we use Git and Github as a course delivery system in the UBC MDS program
git-novice: Software Carpentry introduction to Git for novices.
good-enough-practices-in-scientific-computing: Minimalist alternatives to "best practices" paper
homebrew-science: :microscope: Scientific formulae for the Homebrew package manager
IBRO: C. elegans teaching materials and exercises for 2015 IBRO in Vancouver
img_via_md: null
instructor-retreat-2015: null
intro_python: null
Int_Shell_Lesson: Intermediate lesson for the Scientific Programming Study Group at SFU
Jonah_Final_Project: null
jupyter_notebook_tools: null
knitr-examples: a collection of knitr examples
kubeadm-bootstrap: Supporting code + documentation for bootstrapping a kubeadm installation on bare-metal-ish machinery
Kyles_project: null
kymograph_analysis: null
lm_and_glm: null
makefile2graph: null
make-novice: Novice lesson on Make
MD5_check_with_webdav: Tutorial on how to check the MD5 sum/hash on your files you copied to webdav
mds-instructor-1-position: null
memegenerator: Meme Generator using Python and PIL, Alfred2-Workflow as a bonus
Million-Mutation-Project-dye-filling-SKAT: Genomic data and code to accompany the SKAT analysis of Million Mutation Project strains dye-filling phenotypes reported in Timbers et al.
Million_Mutation_Project_Genome_Phenome_Wide_Analysis: null
MURAT: null
MWT_CO2_summary_analysis: null
MWT-hecd-1_analysis: null
MWT_Locomotion_summary_analysis: null
NGS_reproducibility: null
packaging_guide: rOpenSci Style Guide
pandas_tutorial: Pandas tutorial for SciPy2015 conference
phageParser: null
plot_avg_velocity: null
project_cookie_cutter: null
python_convertemp: null
Python_MWT_Locomotion_summary_analysis: null
python-novice-inflammation: Software Carpentry introduction to Python for novices using inflammation data.
pythonPandasLesson: A basic introduction to exploring tabular data with pandas.
Python_scripts: null
Python_thoughts: null
regex-v5: Adapting Software Carpentry v4 lesson on regex to v5 template & rewriting
Repeating_things_in_R_lesson: null
rhomboid: Rhomboid, a set of tools for delivering a course on GitHub
r-novice-gapminder: Introduction to R for non-programmers using gapminder data.
r-novice-inflammation: Software Carpentry introduction to R for novices using inflammation data.
R_scripts: null
Sab_Final_Project: null
Sampling_Distributions_Lesson: Lesson on sampling distributions for application to Quest University (2015-12-01)
scikit-bio: scikit-bio is an open-source, BSD-licensed, Python package providing data structures, algorithms, and educational resources for bioinformatics.
shell-novice: Software Carpentry introduction to the shell for novices.
Shell_scripts: null
site: Software Carpentry web site.
SKAT: null
SKAT_NGS-2015: null
STAT545-UBC.github.io: Main repository for STAT 545 @ University of British Columbia, a course in data wrangling, exploration, and analysis with R.
SWC-bug-bbq: null
test2: null
test_drive: null
test_job_array: null
test_Makefile_PBS_JOBID: test to see how I can use PBS_JOBID as a variable in a Makefile on Compute Canada
testR: null
test_R_package: null
test-workshop-template: null
tiffany: Test repo for tutorial
tracker-commons: Compilation of information and code bases related to open-source trackers for C. elegans
ttimbers.github.io: Personal blog/website
UBC-stat-sample-lesson: null
ubuntu-sqlite3: Dockerfile for Docker image that run SQLite3
unique_extract: null
VanPy_2015: null
website: Software Carpentry website

Commits To

Repository	Most Recent Commit	# Commits
hackseq/October_2016	2016-09-25 18:12:03.0	46

This work is supported by the National Institutes of Health's National Center for Advancing Translational Sciences, Grant Number U24TR002306. This work is solely the responsibility of the creators and does not necessarily represent the official views of the National Institutes of Health.