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Login: j-hudecek

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Blog:

Repositories

cbioportal

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dalliance-plugin

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Guesv

C# library for loading csv, tsv or other regularly shaped files guess-separated-values.

j-hudecek.github.io

crossroad

openseadragon

An open-source, web-based viewer for zoomable images, implemented in pure JavaScript.

openseadragon-annotations

Draw/erase annotations, measure and add info bubbles over deep zoom images

OpenslideCs

OpenSlide API C# interop with DeepZoom support

ProteinCCD

Java code for Protein Crystallographic Construct Designer

qupath

Quantitative Pathology

Rmodules

A R statistical analysis module plugin for tranSMART

tm2cbio

Utility to translate tranSMART export files to a directory ready for import to cBioPortal

transmartApp

tranSMART is a knowledge management platform that enables scientists to develop and refine research hypotheses by investigating correlations between genetic and phenotypic data, and assessing their analytical results in the context of published literature and other work.

transmart-core-api

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transmart-core-db

Implementation of transmart-core-api for PostgreSQL/Oracle/H2

transmart-data

Tools for managing tranSMART's database

tranSMART-ETL

tranSMART ETL pipelines and configurations

transmart-loader

tranSMART import functionality implemented in Groovy

transmart-mydas

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tus-dotnet-client

tus.io Client for .Net

Commits To