Tim O'Donnell

Login: timodonnell

Company: Mount Sinai School of Medicine

Location: NYC

Bio: null

Blog:

Blog:

Member of

1. Hammer Lab

Repositories

alaya

Python library to expose status info or debug output to interested users via a web server embedded in the process

eventlearn

feature extraction from irregularly-spaced timeseries

gcloud-psql-cron

Send pg_dump backups to gcloud storage buckets

genomisc

miscellaneous analysis tools for next generation sequencing datasets

immuno

Predicting immunogenicity of short peptides

ipython

Official repository for IPython itself. Other repos in the IPython organization contain things like the website, documentation builds, etc.

mhcpred

MHC Binding Prediction

nametagday

null

pepnet

Neural networks for amino acid sequences

pyfaidx

pyfaidx: efficient pythonic random access to fasta subsequences

pyopen

load csv, excel, json, hdf5, and pickle files into an ipython session

scikit-learn

scikit-learn: machine learning in Python

sefara

practical dataset management

sparkbox

tools that use Spark's MLlib

tahini

experiments with apache scrunch

timodonnell.github.io

personal site

Commits To