Kate Crosby

Login: kate-crosby

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Blog:

Repositories

altitude_moisture
quick grab of rasters and comparison of SA and Mex
blups_R
null
chone
repo for chone misc
circleplot
Tools for exploring distance matrices using circular plots.
cv
Repo for working CV.
datatable_slides
slides for datatable and stringr
elasticnet
Elastic nets, lasso, ridge, examples, etc.
expanding_polyps
Repo for polyploid expansion wave idea
GDB-sim
A shiny application that simulates plant disease spread on a 25x25 grid
GRaF_paper
Repo containing GRaF - scripts, some data.
historical_genomics_MS
MS historical genomics
pedigree
maize pedigrees
phasing
Repo for phasing and imputation
phasing_tests
null
PolygenicAdaptationScript
null
posterMGC
posterMGC
ProgenyArray
An R package to work with half-sib progeny array data
quant_genR_tucson
Repo for quantitative gen for Tucson Plant Breeding Institute
reproductive_economy_in_oats
Little R simulation I wrote for paper back in 2012 when all I could do was "for" loops.
SeeDs
Ideas for SeeDs data
sfsGBS
SFS with GBS data
simulation_epistasis
Rough R script for drift simulation two trait, four locus population change
s_lattice
HMM-based estimator for selection coefficients in both single and lattice populations
SweeD
positive selection scans maize post 80s
wrangling-genomics
Lesson for wrangling genomics data

Commits To

RepositoryMost Recent Commit# Commits
datacarpentry/wrangling-genomics2017-06-22 20:01:46.014


This work is supported by the National Institutes of Health's National Center for Advancing Translational Sciences, Grant Number U24TR002306. This work is solely the responsibility of the creators and does not necessarily represent the official views of the National Institutes of Health.