Hannes Roest

Login: hroest

Company: University of Toronto

Location: Toronto

Bio: null

Blog: http://www.hroest.ch

Blog: http://www.hroest.ch

Member of

1. BioContainers

Repositories

autowrap

Generates Python Extension modules from Cythons PXD files

awesome-cpp

A curated list of awesome C/C++ frameworks, libraries, resources, and shiny things. Inspired by awesome-... stuff.

BioContainers.github.io

Docker for Bioinformatics

bookstorage

A rails project for management of books

buchliste

null

containers

Bioinformatics containers

containers-rules-manuscript

Recommendations to contenarized your bioinformatics software

contrib

The OpenMS contrib libraries

CppLowess

A pure C++ implementation of the lowess algorithm using templates

crawdad

Chromatographic Peakpicker -- Fork of the Crawdad code from proteowizard using CMake build system

cylowess

null

debian-autowrap

null

debian-msproteomicstools

null

dockerfiles

This repository holds Dockerfiles for creating docker images for several OpenMS configurations based on different base images.

docker_files

null

docker-trigger-openms

null

flaming-archer

null

gatk-protected

GATK Official Release Repository: contains the core MIT-licensed GATK framework, plus "protected" tools restricted to non-commercial use only

hardklor

Automatically exported from code.google.com/p/hardklor

HugeSeq

For original Nature Biotechnology Publication (Q1 2012)

latex-tools

null

metabolomeDB

local metabolite database

MetFusion

MetFusion provides an integrative approach to combine data from different sources in order to improve the identification of compounds from metabolomics experiments via MS and NMR data.

MIDAS

Metabolite Identification via Database Searching

misc

misc

ms-numpress

Implementations of two compression schemes for numeric data found from mass spectrometers.

msproteomicstools

Some hopefully useful tools for mass spectrometry applied to proteomics

msproteomicstools-svn-mirror

null

mwparserfromhell

A Python parser for MediaWiki wikicode

OpenMS

The codebase of the OpenMS project

OpenMSdata

null

OpenMS_lowmem

null

openms-testfiles

null

pwizOpenMS_crossover

null

pwiz_readspeed

Measure the speed of mzML reading for ProteoWizard

pymzML

pymzML - an interface between Python and mzML Mass spectrometry Files

pyopenms-extra

pyOpenMS extra utilities, scripts and examples

pyprophet

python reimplementation of mProphet

pyprophet-1

Python reimplementation of mProphet algorithm

python-ddb

A python module to access DDB datastructures

python-perlmodule

Python perlmodule (based on pyperl 1.0.1)

pywikibot-compat

Github mirror of "pywikibot/compat" - our actual code is hosted with Gerrit (please see https://www.mediawiki.org/wiki/Developer_access for contributing

pywikibot-core

This is a mirror from https://gerrit.wikimedia.org. See https://www.mediawiki.org/wiki/Developer_access for contributing.

pywikipedia-git

null

RforProteomics

Using R and Bioconductor packages for the analysis and comprehension of proteomics data.

scikit-datasmooth

scikits.datasmooth repository

screen

Git clone of the official screen project https://savannah.gnu.org/git/?group=screen

sima

SIMA

simrtu

Automatically exported from code.google.com/p/simrtu

specs

BioContainers specifications

spellcheck-data

Data for spellcheck

srmcollider

Computes interferences in SRM (Selected Reaction Monitoring) experiments.

thesis-template

A LaTeX template for academic theses

ToGL

Direct3D to OpenGL abstraction layer

Tools

null

vcflib

a simple C++ library for parsing and manipulating VCF files, + many command-line utilities

vim-slime

A vim plugin to give you some slime. (Emacs)

wikipedia-toolserver

Repository for all my toolserver scripts

wikipedia-toolserver-meta

Repository for all my toolserver libraries

wikireview

null

wikispell

Spellchecker for Wikipedia articles based on pywikibot

Commits To