Jake Biesinger

Login: jakebiesinger

Company: University of California, Irvine

Location: Irvine, CA

Bio: null

Blog:

Blog:

Member of

1. Computational Biology and Computational Learning @ UCI
2. Google

Repositories

AREM

AREM -- Aligning Reads by Expectation-Maximization

bedtools

A powerful toolset for genome arithmetic.

biopython

Official git repository for Biopython (converted from CVS)

cotools

functional tools for cooperative multitasking.

Fling

Fling media to a ChromeCast device

git-cl

a git-command for integrating reviews on Rietveld

git-cola

git-cola: The highly caffeinated git GUI

google-code-issues-migrator

A simple script to migrate issues from google code to github.

HTS-waterworks

A Ruffus pipeline for Analysis of High-Throughput Sequencing data

ipython

Official repository for IPython itself. Other repos in the IPython organization contain things like the website, documentation builds, etc.

motility

null

pybedtools

Python wrapper -- and more -- for Aaron Quinlan's BEDTools (bioinformatics tools)

PyGithub

Python library implementing the full Github API v3

pymc

Bayesian inference in Python

RstPreview

RstPreview - a SublimeText plugin to view RST files in your browser.

ruffus

Ruffus is a lightweight python module for running computational pipelines.

scikit-learn

scikit-learn: machine learning in Python

StarCluster

StarCluster is a utility for creating and managing computing clusters hosted on Amazon's Elastic Compute Cloud (EC2).

Commits To