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Kirstie Whitaker

Login: KirstieJane

Company: @alan-turing-institute @WhitakerLab @mozillascience

Location: London and Cambridge, UK

Bio: Research fellow at the Turing Institute and 2016/17 Mozilla fellow for science. Passionate about diversity and reproducibility in all forms.

Blog: https://whitakerlab.github.io

Member of

Repositories

2017-fellows-sf: 2017 MozFellows Workweek - SF
2017-phd-students: Repository for the reproducible research session
ALC_TeamCal: The UC Berkeley AIDS Lifeycle team page
all-contributors: ? Recognize all contributors, not just the ones who push code ?
all-contributors-atom: Atom plugin for easy implementation of all-contributors spec within atom editor
are-white-people-talking-too-much: time who's dominating the conversation
bingo-board: Play bingo :boom: by sending pull requests!
brainhackwarsaw.github.io: This is the source code of the website for the brainhack Warsaw conference, November 18-19 2017. Adapted from SinglePaged - Simple Jekyll template
BrainNetworksInPython: Code to analyse structural covariance brain networks using python.
BRAINWORKS_CODE: null
cambrainhack2017: Website for Cambridge satellite of Brainhack-Global 2017
Cambridge_Scripts: Code written at for Postdoctoral Work Cambridge
clubs-events: Mozilla Clubs Events tracker.
code-is-science: Scientific code needs to be open source and peer reviewed
coding-the-mind: null
DataLiteracyPlayground: null
data-neuroscience: Introducing neuroscience through data exploration and analysis
datasciencecoursera: A repository for the Data Science Specialization on Coursera
datasharing: The Leek group guide to data sharing
DESCRIBING_DATA: Code for data visualization
DIME: DIME is the Diffusion Imaging Motion Evaluator. It provides a succinct report of your participant's diffusion tensor imaging data quality using tools provided by FSL, Freesurer and Python.
DTI_PROCESSING: A general processing pipeline for diffusion data
fellows-class-2016: The go-to place for materials, contributions and work for the 2016 Mozilla Fellows for Science.
FellowsFunWithDat: This is a repository to see if Kirstie can get the dat project working on her laptop
fidgit: An ungodly union of GitHub and Figshare
friendly-github-intro: This is a beginner friendly introduction to making open, version-controlled, and collaborative projects using Github.
FSL_COMMUNITY_CODE: Code saved from the FSL mailing list
GENERAL_CODE: Bits and pieces that are useful in lots of different ways
gh-pages-blog: The fast and simple way to use GitHub Pages and responsive Bootstrap as your blog and basic website for your GitHub project or account.
github-intro-camb: Repository for "A Friendly Github Intro Workshop"
gitignore: A collection of useful .gitignore templates
global2017: webpage for Brainhack Global 2017
global-sprint: Mozilla Global Sprint 2018
governance: The governance process and model for Project Jupyter
introduction-to-nhw: null
IQandCorticalThickness_Replication: This repository contains code to replicate the Shaw et al 2006 paper "Intellectual ability and cortical development in children and adolescents"
JHExcellenceInPlotting: Kirstie Whitaker's submission to the 2014 JH Excellence in Plotting Competition
kaggle-data-science: For Kaggle data science problems
kids: null
kids_rsfMRI_motion: null
KirstieProjectManagement: This is the repository in which Kirstie keeps all her issues/documentation/WIPs etc.
LeiCA_LIFE: null
LIFE_RS_preprocessing: null
maybrain: Python based neuroimaging network analysis package
me-ica: Core code for ME-ICA command line interface
MELDProject.github.io: Website for Multi-centre Epilepsy Lesion Detection (MELD) Project
mentalhues: This is a web app that aims to diminish the stigma associated with mental illness
Moon: Moon is a minimal, one column jekyll theme.
mozfest15-training: Notebooks for Jupyter training session at Mozfest 2015
mozfest2015-session: A starting point for building graphs with Cytoscape.js during the MozFest 2015 open science session
MozWOW-SA: This is a test repository made in Cape Town
MRIMPACT_CODE: Code designed to be used with MRIMPACT data
network-comparison: An R package implementing the NetEMD and NetDis network comparison measures
NHW16-testing: Sample repository for testing tutorial
nilearn: Machine learning for NeuroImaging in Python
NORA_WhitakerVendetti_DevSci2017: Code to reproduce the figures in the NORA manuscript "Neuroscientific insights into the development of analogical reasoning".
NSPN_CODE: Code written for the NSPN project
NSPN_MRIProcessing: This repository contains code and instructions for processing NSPN MRI scans
NSPN_WhitakerVertes_PNAS2016: Data and analysis code to reproduce the NSPN Manuscript "Adolescence is associated with genomically patterned consolidation of the hubs of the human brain connectome".
ohbm-hackathon-github: null
OHBM-WOW-2017: Mozilla Science Lab's Working Open Workshop at OHBM Hackathon - June 2017
OpenAdvice: A website providing agony aunt style advice to people who want to work openly but currently find themselves in a closed enviroment.
OpenConCam.github.io: OpenConCam webpage
OpenScience: Some information on my scientific endeavours behind the scenes
pmc-ref: Check an article's references for free access.
ProgrammingAssignment2: Repository for Programming Assignment 2 for R Programming on Coursera
python-tips-and-tricks: Tips and tricks for make benefit glorious language of Python
quotes: A repo to help anyone learning pull requests
recon-stats: Parse stats outputs from recon-all
roscha_helpers: null
ScansForParticipants: This repository contains code required to create fun "thank you" packs for participants in MRI studies. It takes the structural scans and makes pictures and movies of the brain. The appropriate programs are also included.
science.mozilla.org: Making research collaborative, accessible, and usable
shablona: A template for small scientific python projects
sheffield-bioinformatics-core.github.io: Website for The University of Sheffield Bioinformatics Core
sparcafrica: SPARC Africa materials
Spoon-Knife: This repo is for demonstration purposes only.
STATISTICS: Code for performing statistics
STEMMRoleModels: Inspire future generations by providing the most exciting and diverse speakers for your conference.
TuringReproducibleResearch: This repository contains code and documentation to support reproducible research at the Turing Institute
UCHANGE_ProcessingPipeline: This repository contains code and instructions for processing UCHANGE MRI scans.

Commits To

Repository	Most Recent Commit	# Commits
satra/RIG	2017-07-18 06:52:51.0	71

This work is supported by the National Institutes of Health's National Center for Advancing Translational Sciences, Grant Number U24TR002306. This work is solely the responsibility of the creators and does not necessarily represent the official views of the National Institutes of Health.