Shyam Rallapalli

Login: shyamrallapalli

Company: null

Location: null

Bio: null

Blog:

Blog:

Member of

1. Ash Dieback Crowdsourcing Project
2. Bionode Hack
3. Team MacLean Bioinformatics
4. null

Repositories

analysis_scripts

This folder contains scripts generated for summary and data extraction

cheripic

a ruby tools to pick causative mutation from bulks segregant sequencing

cheripic-shiny-app

a shiny app to display cheripic variants

ebola_google_trends

Model google trends data for ebola using Fraxinus derived function

fraxinus

fraxinus data updates

fraxinus_version1_data_analysis

Analysis of Fraxinus (https://apps.facebook.com/fraxinusgame/) version1 data

google-api-ruby-client-samples

Samples for the Google API Ruby Client

h_pseu_analysis

null

mutations_hts_noref

Repository comprising data and analysis about arrange contigs based on allele frequency

oadb_database_article

oadb database article

order_frgament_genome_vars

Ordering fragmented genomes sequnces using variant information

pileup-processor

A GO lib to read a pileup file and select variant positions and write out a json

publication_data

null

shyamrallapalli.github.io

Repo to test github.io

simulate_bulk_sequence

a progeny simulator to allow bulk segregant sequencing

SNP_distribution_method

null

Unicycler

hybrid assembly pipeline for bacterial genomes

Commits To