Saskia Hiltemann

Login: shiltemann

Company: Erasmus Medical Center, Rotterdam, The Netherlands

Location: Netherlands

Bio: Bioinformatician at Erasmus University Medical Center

Blog: https://shiltemann.github.io

Blog: https://shiltemann.github.io

Member of

1. CTMM TraIT
2. Erasmus Medical Center
3. Galaxy Project
4. Intergalactic Utilities Commission
5. null

Repositories

2017-11-08-test

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annovar-galaxy-tool

Galaxy wrappers for ANNOVAR

bioconda-recipes

Conda recipes for the bioconda channel.

cellular-automata-suite

Cellular Automata and Reaction-Diffusion pattern formation fiddle (Bachelor & Master theses)

cheatsheets

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choosegalaxy

landing page for choosegalaxy.nl

CTF-writeups-public

Writeups for infosec Capture the Flag events

docker-galaxy-rstudio-RODBC

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docker-galaxy-stable

:whale::bar_chart::books: Docker Images tracking the stable Galaxy releases.

docker-recipes

:whale: Dockerfiles to build Galaxy images

docker-rstudio-notebook

RStudio running in a docker container. This image can be used to integrate RStudio into Galaxy

dotfiles

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EMC-Training-Galaxy-Flavour

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ephemeris

Library for managing Galaxy plugins - tools, index data, and workflows.

ethercalc-galaxy-ie

Galaxy Interactive Environment for the Ethercalc spreadsheet application

galaxy

Data intensive science for everyone.

galaxy-circos-tool

Convenient wrapper around Circos allowing building of a huge variety of highly configurable Circos plots

galaxy-hub

Galaxy Community Hub

galaxy_ie_helpers

Helper scripts to work with Galaxy's Interactive Environments

galaxy-metagenomics

:whale: Galaxy Docker repository for metagenomics (Galaxy metagenomics flavour)

Galaxy-Owncloud-Integration

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Galaxy-Tools

EMC/CTMM TraIT Galaxy Tools

git-novice

Software Carpentry introduction to Git for novices.

happy2016

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hello-world-interactive-environment

Simple "Hello, World" for building Galaxy IEs.

iReport

iReport Galaxy tool

iReport2

like iReport1 but less horrible

nl-galaxy-website

For now, the landing page for the Dutch national Galaxy initiative.

phinch-galaxy-ie

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poretools

a toolkit for working with Oxford nanopore data

presentations

Collection of my slides created with GitPitch

public-galaxy-servers

Machine readable list of public Galaxy servers.

recipes

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SECIMTools

A set of metabolomics tools for use in Galaxy

shiltemann.github.io

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tools-devteam

Contains a set of Galaxy Tools mostly written by the Galaxy Team.

tools-iuc

Tool Shed repositories maintained and developed by the Intergalactic Utilities Commission

training-material

A collection of training material from offered Galaxy courses

usegalaxy-eu-tools

List of tools included in https://usegalaxy.eu

Virtual-Normal-Correction

Set of commandline tools for analysis of tumor variants without a matching normal. Method described in Genome Research: http://genome.cshlp.org/content/25/9/1382.full

website

UseGalaxy.EU website (compiled version https://github.com/usegalaxy-eu/usegalaxy-eu.github.io)

workshop-template

Template for workshop websites.

write-ups-2015

Wiki-like CTF write-ups repository, maintained by the community. 2015

Commits To