Thomas Down

Login: dasmoth

Company: null

Location: null

Bio: null

Blog:

Blog:

Member of

1. BioJava
2. bionode
3. null

Repositories

acetyl

ACeDB client

apogee

A ClojureScript SVG and charting library

backprop-demo

null

batman

Bayesian Tool for Methylation Analysis

bigTab

null

bioclojure

Seed of a bioclojure library

bio.io.vcf

Library for working with VCF (Variant Call Format) data

bud

Bioinformatics Utilities for Dart

camclj-instaparse

Instaparse demos

clj-orient

Wrapper for the OrientDB Native APIs. It supports version 1.1 of the APIs.

cramble

null

dalliance

Interactive web-based genome browser.

dalliance_dart

Odds and ends relating to the Biodalliance project

dalliance-synteny-demo

Simple testbed for synteny browsing using Bioalliance.

das-sources

Miscellaneous genomic DAS backends for Dazzle

dastard

Interactive DAS server

edn-perl

Simple EDN library for Perl

gorilla-repl

A rich REPL for Clojure in the notebook style.

gtf2bed

GTF to BED conversion

headless-biodalliance

Command line genome image renderer

hts-scripts

Assorted scripts for processing HTS data.

hubbub

Tools for preparing track-hub-style datasets.

incanter

Clojure-based, R-like statistical computing and graphics environment for the JVM

jni-glmnet

Small JVM wrapper for glmnet

jszlib

Javascript port of zlib

ldserv

Simple server for on-the-fly LD calculations

leiningen

Automate Clojure projects without setting your hair on fire.

LifeForce

One-finger implementation of Conway's Game of Life, with a "force-touch" based interface.

md4

null

metharray-scripts

Scripts for normalization and analysis of methylation array data

ok

An open-source interpreter for the K5 programming language.

read-orientation-plugin

Dalliance plugin for improved stylability of BAM reads

robin

Call differences between epigenomic datasets

website

The WormBase web application and external model

web-ui

Use web components and MDV templates to build web apps with Dart

wibToWig

Convert old-style binary wiggle (.wib) files back to .wig format

Zlib

Zlib written in pure Dart. Supports DEFLATE/INFLATE compression algorithms.

Commits To