Tim Holy

Login: timholy

Company: Washington University in St. Louis

Location: St. Louis, Missouri, USA

Bio: Neuroscientist and developer of the Julia language and its packages, including those of the @JuliaImages organization

Blog: http://holylab.wustl.edu

Blog: http://holylab.wustl.edu

Member of

1. The Julia Language

Repositories

AffineTransforms.jl

Computational geometry with affine transformations

AllenBrain.jl

Accessing and analyzing data from the Allen Brain Atlas

ANTsRegistration.jl

Convenience wrapper for image registration using the Advanced Normalization Tools

ArrayFire.jl

Julia wrapper for the ArrayFire library

ArrayIteration.jl

Testing new ideas for array iteration

ArrayViewsAPL.jl

Generic array-view type with APL indexing semantics

ASTInterpreter.jl

Gallium's AST interpreter as a separate package to simplify development

AxisAlgorithms.jl

Efficient filtering and linear algebra routines for multidimensional arrays

AxisArrays.jl

Performant arrays where each dimension can have a named axis with values

BinDeps.jl

Tool for building binary dependencies for Julia modules

Cairo.jl

Bindings to the Cairo graphics library.

Calculus.jl

Calculus functions in Julia

CallGraphs.jl

Analysis of source callgraphs for julia

CameraUnits.jl

Registry of gain conversions for scientific cameras

Cartesian.jl

Fast multidimensional algorithms

CategoricalArrays.jl

Arrays for working with categorical data (both nominal and ordinal) in Julia

Clang.jl

Julia access to the libclang interface of the LLVM Clang compiler.

Clustering.jl

A Julia package for data clustering

Codecs.jl

Common data encoding algorithms

ColorBrewer.jl

A Julia library for generating color brewer color schemes.

Color.jl

Basic color manipulation utilities.

ColorTypes.jl

Color primitives for Julia, based on FixedSizeArrays

compose

Declarative vector graphics

ComputationalResources.jl

Julia package for selecting hardware, libraries, and algorithms for a computation

ComputedFieldTypes.jl

Build types in Julia where some fields have computed types

CoordinateSplittingPTrees.jl

Accurate and efficient full-degree multidimensional polynomial interpolation

CoordinateTransformations.jl

A fresh approach to coordinate transformations...

Coverage.jl

Take Julia test coverage results and bundle them up in JSONs

Cpp.jl

Utilities for calling C++ from Julia

CRC32.jl

32-bit cyclic redundancy check (CRC-32) checksum implementation for Julia

CUTEst.jl

Julia's CUTEst Interface

Cxx.jl

The Julia C++ Interface

DataArrays.jl

Data structures that allow missing values

DataFrames.jl

library for working with tabular data in Julia

DataStructures.jl

Julia implementation of Data structures

DebuggingUtilities.jl

Simple utilities for debugging julia code

Debug.jl

Prototype interactive debugger for Julia

DimensionalityReduction.jl

Methods for dimensionality reduction

Distances.jl

A Julia package for evaluating distances(metrics) between vectors.

Distributions.jl

A Julia package for probability distributions and associated functions.

Docile.jl

Julia package documentation system.

Documenter.jl

A documentation generator for Julia.

DoubleDouble.jl

Extended precision arithmetic for Julia

DualNumbers.jl

Julia package for representing dual numbers and for performing dual algebra

Dummy.jl

Testing repo

DWARF.jl

Julia Package for parsing the DWARF file format

ElasticArrays.jl

Under development

ELF.jl

Julia Package for working with ELF files

Escher.jl

Composable Web UIs in pure Julia

ExpressionUtils.jl

Utilities for working with the Julia `Expr` type

FastAnonymous.jl

Fast "anonymous functions" for Julia

FieldTraits.jl

Dictionary like, Record like, Trait like composed types with mostly static typing

FixedPointNumbers.jl

fixed point types for julia

FixedSizeArrays.jl

Julia's generic FixedSizeArray implementation. Can be used for all kinds of Vector constructs

ForwardDiff.jl

Julia package for performing forward mode automatic differentiation

gadfly

Crafty statistical graphics for Julia.

Gallium.jl

The Julia debugger

GAMSFiles.jl

Parse GAMS files and return objective functions and other problem information

GAMSFiles.jl

Parse GAMS files and return objective functions and other problem information

GAMSFiles.jl

Parse GAMS files and return objective functions and other problem information

GAMSFiles.jl

Parse GAMS files and return objective functions and other problem information

GLAbstraction.jl

Utility package for ModernGL

GLFW.jl

Julia interface to GLFW, a multi-platform library for creating windows with OpenGL contexts and managing input and events.

GLPlot.jl

Plotting for Julia with OpenGL

GLVisualize.jl

Visualization library written in Julia and OpenGL

GLWindow.jl

Create a window with an OpenGL context

Graphs.jl

Working with graphs in Julia

Grid.jl

Interpolation and related operations on grids

GtkInteract.jl

Port of Interact.jl functionality with Gtk

Gtk.jl

Julia interface to Gtk windowing toolkit.

GtkUtilities.jl

Interactive utilities for the Gtk toolkit (Julia)

HackThatBase.jl

null

HalideCall.jl

Use shared libraries created by Halide from Julia

HemirealFactorizations.jl

Matrix factorizations over the hemireals

HemirealNumbers.jl

Implementation of hemireal arithmetic for Julia

Hexagons.jl

Useful tools for working with hexagonal grids

HyperDualNumbers.jl

Julia implementation of HyperDualNumbers

HypothesisTests.jl

T-tests, Wilcoxon rank sum (Mann-Whitney U), signed rank, and circular statistics in Julia

ImagineFormat.jl

Read .imagine files in Julia

IntroToJuliaWashU

A Jupyter notebook giving an overview of the Julia programming language

Ipopt.jl

Julia interface to the Ipopt nonlinear solver

IProfile.jl

Profilers for Julia

IterativeSolvers.jl

Implement Arnoldi and Lanczos methods for svds and eigs

Iterators.jl

Common functional iterator patterns.

ITKTestImageFormats

Test which image format uses which IO and which image format it supports

JLD2.jl

HDF5-compatible file format in pure Julia

JSON.jl

JSON parsing and printing

julia

The Julia Language: a fresh approach to technical computing.

Julia.jl

Curated decibans of Julia language.

julialang.github.com

Julia Project Web Site

julia-matlab

Matlab interface for calling Julia

JuliaParser.jl

A rewrite of Julia's parser in Julia

julia-test

null

JuMP.jl

Modeling language for Mathematical Programming (linear, mixed-integer, conic, nonlinear)

KernelTools.jl

Fast kernel/stencil operations in Julia

Layout.jl

Graphics layout management for Julia

LIBSVM.jl

LIBSVM bindings for Julia

libuv

platform layer for node.js

LightGraphs.jl

An optimized graphs package for Julia

LinAlgHeaders.jl

Wrap headers for julia's linear algebra dependencies

Lint.jl

A fairly basic lint tool for Julia code

Loess.jl

Local regression, so smooooth!

MacroExpandJL.jl

Save the result of macro-expanded functions to Julia files

MacroTools.jl

A man has written a package. A package has no name.

MakiE.jl

High level plotting on the GPU

MakiE.jl

High level plotting on the GPU

MakiE.jl

High level plotting on the GPU

MakiE.jl

High level plotting on the GPU

Markdown.jl

Markdown parsing for Julia

MathProgBase.jl

Solver-independent functions (i.e. linprog and mixintprog) and low-level interface for Mathematical Programming

MATJulia

Call Julia from Matlab

METADATA.jl

Metadata for registered Julia packages.

MetadataTools.jl

Functionality to analyze the structure of Julia's METADATA repository

Morsel.jl

Sinatra-like micro framework for web programming in Julia

MultilevelCoordinateSearch.jl

Global optimization without derivatives

MultivariateStats.jl

A Julia package for multivariate statistics and data analysis (e.g. dimension reduction)

Munkres.jl

Munkres algorithm for the optimal assignment problem

mzXML.jl

Load mass spectrometry mzXML files

NamedArrays.jl

Julia type that implements a drop-in replacement of Array with named dimensions

NamedAxesArrays.jl

Performant arrays where each axis can be named

NIfTI.jl

Julia module for reading/writing NIfTI MRI files

NLsolve.jl

Julia solvers for systems of nonlinear equations

NMF.jl

A Julia package for non-negative matrix factorization

OffsetArrays.jl

null

OhMyREPL.jl

Syntax highlighting and other enhancements for the Julia REPL

OpenCV.jl

The OpenCV (C++) interface for Julia

Optim.jl

Optimization functions for Julia

PackageEvaluator.jl

A tool to evaluate the quality of a Julia packages

ParallelAccelerator.jl

The ParallelAccelerator package, part of the High Performance Scripting project at Intel Labs

Patchwork.jl

Virtual DOM for Julia

PkgDev.jl

Julia Package Development Kit

PkgSearch.jl

A Julia REPL utility for package discovery

PlotDocs.jl

Documentation for Plots.jl

PlotlyJS.jl

Julia wrapper/API for plotly.js

Plots.jl

Powerful convenience for Julia visualizations and data analysis

PositiveFactorizations.jl

Positive-definite "approximations" to matrices

ProfileView.jl

Visualization of Julia profiling data

ProgressMeter.jl

Progress meter for long-running computations

PTools.jl

Collection of utilities for parallel processing in Julia

PyPlot.jl

Plotting for Julia based on matplotlib.pyplot

Pyramids.jl

A multi-scale image pyramid representation library for Julia.

PySide.jl

julia interface for accessing Qt via PyCall and PySide

QuadDIRECT.jl

Global optimization without derivatives

Quaternions.jl

A quaternions library for Julia

Quaternions.jl-1

A Julia module with quaternion and dual-quaternion functionality

Ranges.jl

Array-like objects with compact storage for the Julia language

Ratios.jl

Faster Rational-like types for Julia

Reactive.jl

Reactive programming primitives for Julia

Reexport.jl

Julia macro for re-exporting one module from another

RestrictProlong.jl

Efficient multigrid operators for Julia

Revise.jl

Automatically update function definitions in a running Julia session

RISE

RISE: "Live" Reveal.js Jupyter/IPython Slideshow Extension

Rotations.jl

Julia implementations for different rotation parameterisations

Showoff.jl

Nicely format an array of n things for tables and plots

SimpleTraits.jl

Simple Traits: Traits.jl without all the bells and whistles

SIUnits.jl

Efficient unit-checked computation

slate

Beautiful static documentation for your API

SnoopCompile.jl

Making packages work faster with more extensive precompilation

SpatiallyFilteredViews.jl

Memory-efficient spatial filtering of image time slices

StaticArrays.jl

Statically sized arrays for Julia 0.5

static-julia

Static AOT Julia compilation, demos and instructions

StatsBase.jl

Basic statistics for Julia

StrPack.jl

Swiss Army Knife for encoding and decoding binary streams

SymbolicLP.jl

Symbolic linear programming and linear constraints

TerminalUI.jl

Who needs a GUI if you have a terminal?

TexExtensions.jl

Tex Pretty printing of Julia Base types.

Tk.jl

Julia interface to Tk windowing toolkit.

Tokenize.jl

null

Traitor.jl

An early prototype of a traits system for Julia

Tuples.jl

A testbed for an API to access Tuple parameters

TypeCheck.jl

A TypeChecker for Julia

Unitful.jl

Unitful.jl

Units.jl

Infrastructure for handling physical units for the Julia programming language

VariationalOnlineStats.jl

Online estimate of the median by variational/Bayesian methods

VideoIO.jl

Julia bindings for libav/ffmpeg

VT100.jl

Terminal Emulation for terminal UI verification

VTK.jl

Proof of concept VTK bindings for the Julia language

Winston.jl

2D plotting for Julia

WoodburyMatrices.jl

Support for the Woodbury matrix identity for Julia

ZipFile.jl

Read/Write ZIP archives in Julia

Zlib.jl

zlib bindings for Julia

ZMQancient.jl

An archival version of ZMQ.jl for julia_matlab

Commits To