David Osumi-Sutherland

Login: dosumis

Company: www.virtualflybrain.org

Location: null

Bio: null

Blog: http://www.linkedin.com/in/osumisutherland

Blog: http://www.linkedin.com/in/osumisutherland

Member of

1. Virtual Fly Brain
2. null

Repositories

AAO_DRAFT

draft arthropod antomy ontology

allen-cell-experiments

null

bbop-graph-noctua

A subclass of bbop-graph that layers on a complete annotation and graph editing model for the Noctua set of tools.

brainscowl

Easy, text-based interaction with the OWL-API using SCOWL + methods inspired by Brain.

Creative-Commons-4.0-Markdown

Markdown-formatted Creative Commons 4.0 license texts

data-bundle-examples

A repository housing metadata and data files (or links to data files) that are being prepared as sample data bundles for various uses.

dead_simple_owl_design_patterns

A simple system for specifying OWL class design patterns for OBO-ish ontologies.

drosophila-anatomy-developmental-ontology

The home of the Drosophila anatomy and development ontologies

drosophila-anatomy-ontology-test

Testing a new, more standard REPO structure for the DAO. FOR TESTING ONLY - THIS IS NOT AN OFFICIAL DAO/FBBT SITE!

evidenceontology

Evidence Ontology development site: Use *Issues* to request terms. See *Wiki* for term request how to.

flybase-controlled-vocabulary

The home of the FlyBase miscellaneous ontologies - featuring the Drosophila Phenotype Ontology

GO_ticket_report

A little bit of scripting to generate reports of GO tickets. Deals with problem of opaqueness of old imported tickets

Hacking_on_neuroNER

A repo for test ontologies hacked from neuroNER

JOWL

Some Jython wrapping for the OWL API. Not intended to be fully featured.

Jython_travis_test

Testing Jython builds on Travis

legalcode

null

metadata-schema

This repo is for the metadata schemas associated with the HCA

neo4j2owl

Semantics preserving mapping of OWL 2 EL and Neo4J. Under development, do not use.

NIF-Ontology

NIF Standard Ontologies (NIFSTD)

OBOFoundry.github.io

null

ofxstatement-coop

A plugin for generating ofx files from coop bank statement pages

ontology_api_tools

A set of tools for programatic access to ontology resource APIs

owlet

A little OWL in SPARQL.

PhenoImageShare

Phenotype Image Share project - European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Heriot-Watt University Edinburgh, Medical Research Council, Human Genetics Unit Edinburgh

prototypes

repository for building and sharing small prototype ontologies

purl.obolibrary.org

A new system for managing OBO PURLs

sbt_assembly_scowl_test

Testing migration sbt assembly + scowl to newer versions

SciGraph

A Neo4j backed ontology store

sdw

Repository for the Spatial Data on the Web Working Group

travis-jython-test

null

travis_neo4j_API_test

Temp repo for testing neo4J on travis

tsv2pdm

A simple Python module for generating and processing python data structures from tsv files.

VFB_query_notebooks

A collection of ipython notebooks illustrating queries of VFB data

Commits To