monarch-initiative/SciGraph-docker-ncats

Name: SciGraph-docker-ncats

Owner: Monarch Initiative

Description: Docker image for SciGraph ncats instance

Created: 2017-04-20 11:18:36.0

Updated: 2017-04-20 20:26:02.0

Pushed: 2017-04-20 13:50:46.0

Homepage: null

Size: 5

Language: null

GitHub Committers

UserMost Recent Commit# Commits
Jeremy2017-04-20 13:50:43.03

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README

SciGraph-docker-ncats

Build two Docker images with the configs. Uses master HEAD from the SciGraph github repo.

Need to have docker installed in order to run the build.

Generate the docker images locally:

mvn package

Load the graph:

docker run -v /tmp/graph:/scigraph scigraph-load-ncats

Run the services:

docker run -v /tmp/graph:/scigraph -d -p 9000:9000 –name scigraph-services scigraph-services-ncats

Stop the services:

docker stop scigraph-services

Read logs of the services:

docker logs scigraph-services

Tips, remove all the local images

docker rm $(docker ps -a -q)

docker rmi $(docker images -q)

Enabling the image writers

add that in the /etc/rc.local Xvfb :1 -screen 0 800x600x16 &

and that in the /etc/environment export DISPLAY=:1


This work is supported by the National Institutes of Health's National Center for Advancing Translational Sciences, Grant Number U24TR002306. This work is solely the responsibility of the creators and does not necessarily represent the official views of the National Institutes of Health.