Name: transmart-gwas-plink
Owner: Clarivate Analytics Life Sciences
Description: Plink integration for tranSMART
Created: 2016-11-10 20:43:28.0
Updated: 2017-03-20 00:33:23.0
Pushed: 2016-12-14 21:18:06.0
Homepage: null
Size: 38
Language: Groovy
GitHub Committers
User | Most Recent Commit | # Commits |
---|---|---|
Vadim | 2016-12-14 21:18:00.0 | 3 |
Other Committers
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Plink integration for tranSMART
Add the following entry into “inlinePlugins”:
'transmart-gwas-plink': 'transmart-gwas-plink'
and the following entry into “InternalDependenciesFilter”:
compile “:transmart-gwas-plink:$transmartVersion”
in file “DependencyManagement.groovy”
Add the following lines into Config.groovy:
grails.plugin.transmartGwasPlink.enabled=true grails.plugin.transmartGwasPlink.plinkPath='/usr/local/bin/plink'
(the value of the last parameter depends on where you've installed plink binary).
See wiki: https://github.com/ThomsonReuters-LSPS/transmart-gwas-plink/wiki