Name: portal-ui
Owner: Human Microbiome Project
Description: UI for the HMP data portal (found at https://portal.hmpdacc.org)
Forked from: NCI-GDC/portal-ui
Created: 2016-08-25 20:15:35.0
Updated: 2017-10-16 14:29:41.0
Pushed: 2017-09-26 20:19:16.0
Homepage: https://portal.hmpdacc.org
Size: 3713
Language: HTML
GitHub Committers
| User | Most Recent Commit | # Commits |
|---|
Other Committers
| User | Most Recent Commit | # Commits |
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Buzzwords: #typescript #angularjs #immutablejs #gulp #less #bower #selenium #karma #protractor
Before continuing you must have the following programs installed:
Running the setup script will:
setup.sh
it-msg already exists! Backing up to commit-msg.bak... OK
ing up commit-msg git hook... OK
ng commit-msg executable... OK
ng validate-commit.py executable... OK
irming Node is installed... OK
alling NPM dependencies...
p Successful!
Connect to VPN and run ui with
API=https://gdc-portal.nci.nih.gov/auth/api/v0 GDC_FAKE_AUTH=true npm start
Connect to VPN and run api with
ES_INDEX=gdc_from_graph GDC_ES_HOST=ip GDC_ES_USER=user GDC_ES_PASS=pw GDC_PORTAL_ENDPOINT=http://localhost:3000 GDC_FAKE_DOWNLOAD=True python run.py
ES creds can be found on any API machine in /var/www/gdcapi/gdcapi.wsgi
UI can simply be run as usual with
start
Not recommended, would require loading local ES with data.
In order to properly run the UI and login to test the auth you will need to run the application
in a specific way. This includes sudo and running the app on port 80. You will need to ensure
that you don't have something else using that port (like a local apache setup).
The following command should work:
sudo GDC_API=http://portal.gdc.nci.nih.gov:5000 GDC_PORT=80 npm start
In order to support local use of the login system we need to add the following
to your /etc/hosts file:
127.0.0.1 gdc-portal.nci.nih.gov
If you are connecting to a local ES, edit path-to-elastic-search/config/elasticsearch.yml, find the line with http.max_content_length, add
.max_initial_line_length: 1000mb
to increase the max length of a HTTP URL
Git commit-msg hook is based on Angular's Guidelines
The git hooks can be found in git_hooks/
Project dependencies are managed using Bower and NPM
Unit tests are run using Karma
m test
44:06] Starting Karma server...
[karma]: Port 9876 in use
[karma]: Karma v0.12.24 server started at http://localhost:9877/
[launcher]: Starting browser PhantomJS
[PhantomJS 1.9.7 (Mac OS X)]: Connected on socket m-mK9_Udpg1Jb226Ws3o with id 36984552
shed in 0.014 secs / 0.001 secs
Browser tests are run with Protractor
m run prot
34:28] Starting 'webdriver'...
nium standalone is up to date.
medriver is up to date.
34:28] Finished 'webdriver' after 199 ms
34:28] Starting 'protractor'...
g ChromeDriver directly...
34:32] Finished 'protractor' after 4.23 s
The development server is setup using Browsersync
C_API="http://gdc-portal.nci.nih.gov:5000" npm start
47:02] Environment Development
Local URL: http://localhost:3000
External URL: http://gdc-portal.nci.nih.gov:3000
Serving files from: dist
Read how to contribute here
Gulp bundles all the assets in production mode and creates unique file names for caching
m dist
d 3 matching tests...
ronment Production
ting selenium server in parallel mode...
dist
thon -m SimpleHTTPServer
ing HTTP on 0.0.0.0 port 8000
en http://localhost:8000/
t show maintainer-pgp-pub | gpg --import
t tag --verify [signed-tag-name]