BioDevOps/docker-galaxy-bit

Name: docker-galaxy-bit

Owner: BioDevOps

Description: Galaxy Docker Container

Created: 2016-05-11 05:38:46.0

Updated: 2016-05-13 07:46:26.0

Pushed: 2016-07-27 05:55:09.0

Homepage: null

Size: 34

Language: Shell

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README

docker-galaxy-bit

Galaxy Docker Container

version 0.3.0

er run -e RUNUSER_UID=10000 -e RUNUSER_GID=10000  -p 8080:8080 --rm manabuishii/docker-galaxy-bit:0.3.0

TEST YOUR OWN TOOL

er run -v $PWD/shareddatadirectory/hellogalaxy:/tmp/hellogalaxy -v $PWD/shareddatadirectory/tools/hellogalaxy:/home/galaxy/galaxy-15.07/tools/hellogalaxy -v $PWD/shareddatadirectory/config/tool_conf.xml:/home/galaxy/galaxy-15.07/config/tool_conf.xml -e RUNUSER_UID=10000 -e RUNUSER_GID=10000  -p 8080:8080 --rm manabuishii/docker-galaxy-bit:0.2.0

Clear job working directory

rf shareddatadirectory/job_working_directory/000
This work is supported by the National Institutes of Health's National Center for Advancing Translational Sciences, Grant Number U24TR002306. This work is solely the responsibility of the creators and does not necessarily represent the official views of the National Institutes of Health.