hurwitzlab/make-custom-patric-metagenome

Name: make-custom-patric-metagenome

Owner: Hurwitz Lab

Description: Takes a list of genomic ids (patric format) and ultimately gives you a fasta with all the fetched genomes

Created: 2016-04-09 19:44:00.0

Updated: 2016-04-26 23:46:15.0

Pushed: 2016-09-13 17:19:07.0

Homepage: null

Size: 11529

Language: Python

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make-custom-patric-metagenome

Takes a list of genomic ids (patric format) and ultimately gives you a fasta with all the fetched genomes

Now modifying it to produce a fasta of the full genomes (instead of just the contigs that the DNA aligned to) along with the .gff's


This work is supported by the National Institutes of Health's National Center for Advancing Translational Sciences, Grant Number U24TR002306. This work is solely the responsibility of the creators and does not necessarily represent the official views of the National Institutes of Health.