ContentMine/2015-12-11-dnadigest

Name: 2015-12-11-dnadigest

Owner: The ContentMine

Description: Information for participants of the DNAdigest hackday.

Created: 2015-11-24 13:45:29.0

Updated: 2015-11-26 15:26:32.0

Pushed: 2015-11-24 17:12:06.0

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README

DNAdigest and ContentMine Hackday

From the volunteers and organisers of ContentMine and DNAdigest comes a new hackday!

Tickets available here.

We will use the tools of ContentMine to automatically extract references to genomic datasets from new journal publications. Then we can put them into a big machine-readable database that can be searched by interested humans and machines alike. We would love to have your expertise and help with this experiment!

But we also want to explore with you any other areas where automatic fact extraction could be useful.

Perhaps you work in a field where you have to manually transcribe data from graphs? Or perhaps you would like to scan open-access journals that are only available via the web for a particular word or phrase? ContentMine has tools to do all these things and more.

If you are interested in machine-mining journals, whether that is for genomic dataset DOIs, your own research or just out of general interest, please come along and join us! In-depth programming knowledge is not essential - ContentMine is designed to make mining easy and we will have ContentMine mentors there on the day to help you get familiar with the system.

Event Details

Please take 3 minutes and fill out our evaluation form after the workshop.

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Copyright

Copyright-holder for all works is the Shuttleworth Foundation.

Schedule

| Time | Agenda | Description | |—————|————–|————————————————————————| | 9:30 AM - : | Introduction | Introduction into the workshop and ContentMine. | | : - 4:30 PM | Closing | |

Contribute

We're happy you're thinking about contributing to ContentMine!

There are many ways to contribute:

If you have questions, ask us directly at DNAdigest Hackday or write our training managers a mail (mail ett stefankasberger dot at, web ett christopherkittel dot eu).

When you are online, you can find us:

Further materials

This work is supported by the National Institutes of Health's National Center for Advancing Translational Sciences, Grant Number U24TR002306. This work is solely the responsibility of the creators and does not necessarily represent the official views of the National Institutes of Health.