bio-tools/biotoolsSchema

Name: biotoolsSchema

Owner: bio.tools

Description: biotoolsSchema : resource description model for bioinformatics

Created: 2015-05-05 15:52:46.0

Updated: 2017-11-15 01:40:00.0

Pushed: 2017-12-09 10:51:49.0

Homepage:

Size: 5935

Language: HTML

GitHub Committers

UserMost Recent Commit# Commits
Dan Fornika2018-03-08 21:14:09.01
Matú? Kala?2017-11-15 11:21:03.05
Hervé Ménager2016-10-22 20:34:50.01
Jon Ison2018-03-22 10:30:19.04
Dmitry Repchevsky2017-09-08 13:39:22.016
Hans Ienasescu2017-05-26 12:59:27.02
bug13032018-01-26 16:40:27.01

Other Committers

UserEmailMost Recent Commit# Commits
jongithubjison@cbs.dtu.dk2015-09-16 15:14:42.06
jongithubjison@cbs.dtu.dk2015-09-16 15:14:42.06
Jon Isonjison@ebi.ac.uk2015-06-08 21:24:44.018
Jon Isonjison@ebi.ac.uk2015-06-08 21:24:44.018

README

What is biotoolsSchema?

biotoolsSchema is a formalised XML schema (XSD) which defines a description model for bioinformatics software. It can be used to describe bioinformatics tools - application software with well-defined data processing functions (inputs, outputs and operations). This includes simple tools with one or a few closely related functions, and complex, multimodal tools with many functions. A broad range of software types (see below) are covered including tools available for immediate use as online services, or in a form which which you can download, install, configure and run yourself.

biotoolsSchema defines 50 important scientific, technical and administrative attributes. It concentrates upon the salient common features, with a minimal mandatory core of 3 attributes (name, description and homepage). biotoolsSchema can help to support the cataloguing and discovery of software and is used by the ELIXIR Tools & Data Services Registry.

Documentation

Comprehensive documentation is available:

Information standard

biotoolsSchema provides the foundation for a tools information standard for the desription of tools. It is being adopted by bio.tools and defines the attributes that must be defined within a 5-teir rating of entry completeness.

Software types

See the list of software types supported by the schema.


This work is supported by the National Institutes of Health's National Center for Advancing Translational Sciences, Grant Number U24TR002306. This work is solely the responsibility of the creators and does not necessarily represent the official views of the National Institutes of Health.