Name: 16sblaster
Owner: Hurwitz Lab
Description: null
Created: 2015-03-10 22:46:46.0
Updated: 2015-09-10 18:11:00.0
Pushed: 2015-09-15 16:20:11.0
Homepage: null
Size: 739
Language: Perl
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Perl code, etc., for George's paper.
To build Docker image, first build these programs into the “bin” directory:
To build:
docker build -t 16sblaster .
To run:
docker run --rm -v $(pwd):/work -w /work 16sblaster \
--blast-db /data/blast/16SMicrobial -d fasta -o out \
--accessions /data/accession_organism_map.txt