hammerlab/ngsdiagnostics

Name: ngsdiagnostics

Owner: Hammer Lab

Description: Diagnostic Scripts for an NGS Pipeline

Created: 2014-02-27 20:57:32.0

Updated: 2016-03-16 17:39:47.0

Pushed: 2014-03-30 05:11:12.0

Homepage: null

Size: 832

Language: Python

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README

ngsdiagnostics

Diagnostic Scripts for an NGS Pipeline

To run inside of a venv (preferred):

rl -O 'https://gist.github.com/vsajip/4673395/raw/3420d9150ce1e9797dc8522fce7386d8643b02a1/pyvenvex.py'
thon3 pyvenvex.py venv-ngsdiagnostics
 venv-ngsdiagnostics
urce bin/activate
t clone https://github.com/hammerlab/ngsdiagnostics.git
 ngsdiagnostics
thon setup.py install
n_perfdash.py

You should now be able to navigate to http://127.0.0.1:5000 and view the dashboard running with some sample data.


This work is supported by the National Institutes of Health's National Center for Advancing Translational Sciences, Grant Number U24TR002306. This work is solely the responsibility of the creators and does not necessarily represent the official views of the National Institutes of Health.