Name: StatisticalComputing
Owner: OUHSC BBMC
Description: File repository for the OUHSC's SCUG (Statistical Computing Users Group)
Created: 2014-01-23 03:39:51.0
Updated: 2017-09-01 20:02:52.0
Pushed: 2017-11-06 22:56:09.0
Size: 39909
Language: Jupyter Notebook
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Welcome to the file repository for the OUHSC's Statistical Computing User Group. In the spring of 2018, our regular meeting time remains 9:30-10:30am on the first Tuesday of each month.
Our goal is to facilitate the use of statistical and methodological tools and promote collaboration, mentorship, and discussion of research and analysis.
The code and material from previous presentations in the user group (formerly called the SAS/R User Group) can be accessed here: 2012, 2013, 2014, 2015, 2016, 2017, and 2018.
The group is open to anyone interested in the tools used by statisticians and research methodologists. If you would like to present, please contact Will Beasley. We encourage any students or employees to participate or present . Alternatively, tell us if there?s a technique that would help your research or assignments, and we?ll try to arrange an expert to teach us about it.
The group's steering committee is Mike Anderson and Will Beasley.
We meet in the East Boardroom of the Samis Education Center in Children's Hospital. (If you don't see us in the East Boardroom, walk 50 yds to your right and check if we've been moved to the West Boardroom.) Driving and parking directions are here. Once inside the main entrance (which is Level 2), head slightly to the right and take an elevator down to Level 1. Exit the elevator and turn left; pass through the Samis doors. The East Board Room will be the first room you see. Please join us. Electrical outlets and OUHSC Wi-Fi are available.
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| —— | —————— |
| Apr
3| Performing semi-parametric AUC model in homemade R, Python, and Julia packages.
by Som Bohora, Dept of Pediatrics, Developmental & Behavioral Pediatrics. |
| Mar
6|Open Conversation & Questions.
hosted by Will Beasley, Dept of Pediatrics, Biomedical and Behavioral Methodology Core (BBMC).
Presentations and supplemental material for the meeting. |
| Feb
6| Developing Dashboards for non-Statisticians.
by Will Beasley, Dept of Pediatrics, Biomedical and Behavioral Methodology Core (BBMC). |
| | |
| —— | —————— |
| Dec
5| Bayesian Analysis with Python.
by Blaine Mooers, Department of Biochemistry and Molecular Biology, Laboratory of Biomolecular Structure and Function (LBSF).|
| Nov
7| State Space Mixture Modeling: A Method for Finding People with Similar Change Processes.
by Mike Hunter, Dept of Pediatrics, Developmental & Behavioral Pediatrics.
Presentations and supplemental material for the meeting.|
| Oct
3| Ellis Island: a software pattern for assimilating external data, Part 2. |
| Sep
5| Ellis Island: a software pattern for assimilating external data, Part 1.
by Will Beasley, Dept of Pediatrics, Biomedical and Behavioral Methodology Core (BBMC). |
| Aug
1| cancelled –summer |
| Jul
4| cancelled –holiday |
| Jun
6 | Creating a minimal R package, Part 4: adding more functions. |
| May
2 | Creating a minimal R package, Part 3: adding functions. |
| Apr
4 | Creating a minimal R package, Part 2: testing framework. |
| Mar
7 | Creating a minimal R package, Part 1: initializing package skeleton.
by Will Beasley, Dept of Pediatrics, Biomedical and Behavioral Methodology Core (BBMC).
Presentations and supplemental material for the meeting. |
| Jan
30 | REDCap Experiences at IUPUI.
by Andy Arenson, IUPUI School of Medicine.
| | |
| —— | —————— |
| Dec
6 | Introduction to the R package NIMBLE: Numerical Inference of statistical Models for Bayesian and Likelihood Estimation.
by Blaine Mooers, Department of Biochemistry and Molecular Biology, Laboratory of Biomolecular Structure and Function (LBSF).
Presentations and supplemental material for the meeting.|
| Nov
1 | BBMC Validator: catch and communicate data errors.
by Will Beasley, Dept of Pediatrics, Biomedical and Behavioral Methodology Core (BBMC).
Presentations and supplemental material for the meeting. |
| Oct
4 | Data Manipulation in R & Python: the dplyr, data.table, and dplython packages.
by Som Bohora, Dept of Pediatrics, Developmental & Behavioral Pediatrics.
Presentations and supplemental material for the meeting. |
| Sep
6 | Open Agenda. |
| Aug
2 | Open Agenda. |
| Jul
5 | Open Agenda. |
| Jun
7 | Learning Python Programming Language in Interactive Computing Framework, Part 2.
by Som Bohora, Dept of Pediatrics, Developmental & Behavioral Pediatrics.
Presentations and supplemental material for the meeting. |
| May
3 | Text Manipulation with Regular Expressions, Part 2.
by Will Beasley, Dept of Pediatrics, Biomedical and Behavioral Methodology Core (BBMC)
Presentations and supplemental material for the meeting. |
| Mar
1 | Learning Python Programming Language in Interactive Computing Framework, Part 1.
by Som Bohora, Dept of Pediatrics, Developmental & Behavioral Pediatrics.
Presentations and supplemental material for the meeting. |
| Feb
2 | Text Manipulation with Regular Expressions, Part 1.
by Will Beasley, Dept of Pediatrics, Biomedical and Behavioral Methodology Core (BBMC)
Presentations and supplemental material for the meeting. |
| | |
| —— | —————— |
| Dec
1 | Time and Effort Dataset Synthesis
by Will Beasley, Dept of Pediatrics, Biomedical and Behavioral Methodology Core (BBMC)
Presentations and supplemental material for the meeting. |
| Nov
3 | Monte Carlo Simulation of Data that Follows a Given Covariance Structure
by Dee Wu, Technology Applications & Translational Research, Dept of Radiological Sciences.
Presentations and supplemental material for the meeting. |
| Oct
6 | Interactive reports and webpages with R & Shiny (and screenshots)
by Will Beasley, Dept of Pediatrics, Biomedical and Behavioral Methodology Core (BBMC)
Presentations and supplemental material for the meeting. |
| Jul
7 | Pandas: the primary Python tabular data analysis/manipulation toolkit
by Michael Ripperger, Bioinformatics Student, Vanderbilt
Presentations and supplemental material for the meeting.|
| Jun
2 | Data Mining in Health Analytics and a Quick Look at SAS Enterprise Miner Interface
by Ram Poudel, Research Coordinator, Sooner SUCCESS, Dept of Pediatrics, Developmental & Behavioral Pediatrics
Presentations and supplemental material for the meeting. |
| Apr
7 | Extending Semiparametric AUC Model with Discrete Covariates into General Framework
by Som Bohora, Dept of Pediatrics, Developmental & Behavioral Pediatrics.
The mansucript associated with this presentation is being prepared. Please contact Som if you'd like an advanced copy. |
| Feb
3 | Using knitr with logistic multilevel models and decision support trees
by Som Bohora, Dept of Pediatrics, Developmental & Behavioral Pediatrics.
Presentations and supplemental material for the meeting. |
| | |
| —— | —————— |
| Nov
4 | Getting Started with Bayesian GLMMs in R, SAS, Mplus, & WinBUGS,
by David Bard, Dept of Pediatrics, Biomedical and Behavioral Methodology Core (BBMC)
Presentations and supplemental material for the meeting. |
| Oct
7 | Data Manipulation in R: Using the plyr package and other tools
by Will Beasley, Dept of Pediatrics, Biomedical and Behavioral Methodology Core (BBMC).
(This was a rerun, because the original presenter's babysitter cancelled on him. We chose to redo the plyr talk because many of October's attendees missed Februrary, or wanted to see it again.)
Presentations and supplemental material for the meeting. |
| Sep
2 | Adding Graph Visualization on SAS ODS Output
by Yu Fu Oklahoma State Department of Health (OSDH).
Literate Programming Patterns and Practices with REDCap and REDCapR
by Will Beasley, Thomas Wilson, & David Bard, Dept of Pediatrics, Biomedical and Behavioral Methodology Core (BBMC).
Presentations and supplemental material for the meeting. |
| Jun
3 | A Visual Tour of Extended Structural Equations & State Space Models
by Mike Hunter, (Developmental & Behavioral Pediatrics)
Presentations and supplemental material for the meeting. |
| May
6 | Statistical Collaboration with GitHub
by Will Beasley, Dept of Pediatrics, Biomedical and Behavioral Methodology Core (BBMC)
Presentations and supplemental material for the meeting. |
| Apr
1 | Word Clouds in R: Lofty solutions for qualitative data by Thomas Wilson, Dept of Pediatrics, Biomedical and Behavioral Methodology Core (BBMC).
The Fifer Package, by Dustin Fife, Department of Arthritis and Clinical Immunology, Oklahoma Medical Research Foundation (OMRF).
Presentations and supplemental material for the meeting. |
| Mar
4 | The kaps Package: An Intro to R Packages for SAS Users
by Summer Frank, Biostatistics and Epidemiology (BSE).
Missing Data and Multiple Imputation with SAS,
by Jacob Pleitz, OU Norman Quantitative Psychology.
Presentations and supplemental material for the meeting.|
| Feb
4 | Data Manipulation in R: Using the plyr package and other tools
by Will Beasley, Dept of Pediatrics, Biomedical and Behavioral Methodology Core (BBMC).
Presentations and supplemental material for the meeting. |
| | |
| —— | —————— |
| Aug
19 | Dealing with simple two-way tables using SAS PROC FREQ
by Som Bohora, Biostatistics and Epidemiology (BSE).
Presentations and supplemental material for the meeting. |
| Jun
17 | Spatial Analysis with R, by Maleeha Shaid, Dept of Pediatrics, Sooner SUCCESS |
| Apr
15 | Calculating Subset Weighted Analysis Using PROC SURVEYFREQ and GENMOD
by Jessica Hale, David Thompson, & Paul Darden, Dept of Pediatrics
Presentations and supplemental material for the meeting. |
| Mar
18 | A continuation of Optimizing Study Management using REDCap, R, and other software tools
by Will Beasley, David Bard, & Thomas Wilson, Dept of Pediatrics, Biomedical and Behavioral Methodology Core (BBMC)
Presentations and supplemental material for the meeting. |
| Feb
18 | Bayes Without Tears
by Dee Wu, Dept of Medical Imaging and Radiation Sciences.
Optimizing Study Management using REDCap, R, and other software tools
by Will Beasley, David Bard, & Thomas Wilson, Dept of Pediatrics, Biomedical and Behavioral Methodology Core (BBMC)
Presentations and supplemental material for the meeting. |
| | |
| —— | —————— |
| Nov
19 | Extending R with Compiled C code,
by Michael Anderson, Dept of Biostatistics and Epidemiology (BSE) and Dept of Pediatrics, Biomedical and Behavioral Methodology Core (BBMC).
Presentations and supplemental material for the meeting. |
| Oct
15 | Balanced Anova in R and SAS
by Dee Wu, Dept of Medical Imaging and Radiation Sciences.
Presentations and supplemental material for the meeting. |
| Sep
17 | A Quick Survey of R Usage: Some of Our Favorite Programming, Graphical, Reporting, and Analysis Features,
by David Bard, Will Beasley, & Thomas Wilson, Dept of Pediatrics, Biomedical and Behavioral Methodology Core (BBMC)
Box Plots in SAS
by Summer Frank, Dept of Biostatistics and Epidemiology (BSE).
Presentations and supplemental material for the meeting. |
